RNA–Protein interactions for RNA: ENST00000620879.4

GTF2I-218, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2I, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-218ENST00000620879 IL1RAPL1Q9NZN1 696 aa12.5□□□□□ -0.41
GTF2I-218ENST00000620879 NUP188Q5SRE5 1749 aa12.5□□□□□ -0.41
GTF2I-218ENST00000620879 CLASP2O75122 1294 aaKnown RBP12.5□□□□□ -0.41
GTF2I-218ENST00000620879 FMO4P31512 558 aa12.5□□□□□ -0.41
GTF2I-218ENST00000620879 ABL2P42684 1182 aa12.5□□□□□ -0.41
GTF2I-218ENST00000620879 GPD2P43304 727 aa12.5□□□□□ -0.41
GTF2I-218ENST00000620879 GLUD2P49448 558 aa12.5□□□□□ -0.41
GTF2I-218ENST00000620879 PSEN1P49768 467 aa12.5□□□□□ -0.41
GTF2I-218ENST00000620879 CTBP1Q13363 440 aa12.5□□□□□ -0.41
GTF2I-218ENST00000620879 SEL1L3Q68CR1 1132 aa12.5□□□□□ -0.41
GTF2I-218ENST00000620879 RD3Q7Z3Z2 195 aa12.5□□□□□ -0.41
GTF2I-218ENST00000620879 NSL1Q96IY1 281 aa12.5□□□□□ -0.41
GTF2I-218ENST00000620879 PRKD2Q9BZL6 878 aa12.5□□□□□ -0.41
GTF2I-218ENST00000620879 TRIM15Q9C019 465 aa12.5□□□□□ -0.41
GTF2I-218ENST00000620879 FBXO6Q9NRD1 293 aaPredicted RBP12.5□□□□□ -0.41
GTF2I-218ENST00000620879 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.5□□□□□ -0.41
GTF2I-218ENST00000620879 CHADO15335 359 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 MFSD11O43934 449 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 RNASEH1O60930 286 aaKnown RBP12.49□□□□□ -0.41
GTF2I-218ENST00000620879 TKTP29401 623 aaKnown RBP12.49□□□□□ -0.41
GTF2I-218ENST00000620879 CDK16Q00536 496 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 PURAQ00577 322 aaKnown RBP12.49□□□□□ -0.41
GTF2I-218ENST00000620879 ASTE1Q2TB18 679 aaPredicted RBP12.49□□□□□ -0.41
GTF2I-218ENST00000620879 LDLRAD1Q5T700 205 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 PDPK2PQ6A1A2 396 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 MRPL46Q9H2W6 279 aaKnown RBP12.49□□□□□ -0.41
GTF2I-218ENST00000620879 ZDHHC6Q9H6R6 413 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 SCOCQ9UIL1 159 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 PCDHB9Q9Y5E1 797 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 PTPRJQ12913 1337 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 MOXD2PA6NHM9 499 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 LRIG2O94898 1065 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 IGSF6O95976 241 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 CNTFP26441 200 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 RPA3P35244 121 aaPredicted RBP12.49□□□□□ -0.41
GTF2I-218ENST00000620879 NAGLUP54802 743 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 VSTM1Q6UX27 236 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 TTC7BQ86TV6 843 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 SAPCD2Q86UD0 394 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 CERS2Q96G23 380 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 HNRNPABQ99729 332 aaKnown RBP12.49□□□□□ -0.41
GTF2I-218ENST00000620879 IL22Q9GZX6 179 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 MORF4L1Q9UBU8 362 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 ARHGAP10A1A4S6 786 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 KATNA1O75449 491 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 PIGRP01833 764 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 LMNAP02545 664 aaKnown RBP12.49□□□□□ -0.41
GTF2I-218ENST00000620879 RBP1P09455 135 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 TFE3P19532 575 aaPredicted RBP12.49□□□□□ -0.41
GTF2I-218ENST00000620879 NRLP54845 237 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 NOMO1Q15155 1222 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 TXNRD3NBQ6F5E7 133 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 CTU1Q7Z7A3 348 aaKnown RBP12.49□□□□□ -0.41
GTF2I-218ENST00000620879 PCYOX1LQ8NBM8 494 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 ART4Q93070 314 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 LRRC39Q96DD0 335 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 NDNQ99608 321 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 ACTR8Q9H981 624 aa12.49□□□□□ -0.41
GTF2I-218ENST00000620879 ZMYND8Q9ULU4 1186 aaPredicted RBP12.49□□□□□ -0.41
GTF2I-218ENST00000620879 TRAV19A0A0A6YYK7 116 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 PPM1AP35813 382 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 ZNF135P52742 658 aaPredicted RBP12.48□□□□□ -0.41
GTF2I-218ENST00000620879 WNT3AP56704 352 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 STARD3Q14849 445 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 SPANXN3Q5MJ09 141 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 AGGF1Q8N302 714 aaeCLIP12.48□□□□□ -0.41
GTF2I-218ENST00000620879 FNIP1Q8TF40 1166 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 BBS2Q9BXC9 721 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 TMEM120AQ9BXJ8 343 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 ING2Q9H160 280 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 RIC8BQ9NVN3 520 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 TAS2R13Q9NYV9 303 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 CLCA2Q9UQC9 943 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 IRS2Q9Y4H2 1338 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 C2CD4BA6NLJ0 364 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 TRIM13O60858 407 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 SH3BGRLO75368 114 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 TCF4P15884 667 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 DNAL1Q4LDG9 190 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 CERCAMQ5T4B2 595 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 TDRD5Q8NAT2 981 aaKnown RBP12.48□□□□□ -0.41
GTF2I-218ENST00000620879 ACBD6Q9BR61 282 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 ASPSCR1Q9BZE9 553 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 NEUROG2Q9H2A3 272 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 ARMCX1Q9P291 453 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 PTPRZ1P23471 2315 aaPredicted RBP12.48□□□□□ -0.41
GTF2I-218ENST00000620879 TBX18O95935 607 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 COPAP53621 1224 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 ABCE1P61221 599 aaKnown RBP12.48□□□□□ -0.41
GTF2I-218ENST00000620879 CCDC15Q0P6D6 951 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 TAPT1Q6NXT6 567 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 TAC4Q86UU9 113 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 ECHDC2Q86YB7 292 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 RASGEF1CQ8N431 466 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 SPATA6LQ8N4H0 392 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 TRIML2Q8N7C3 387 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 APOPT1Q96IL0 206 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 ZNF333Q96JL9 665 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 KDM4CQ9H3R0 1056 aa12.48□□□□□ -0.41
GTF2I-218ENST00000620879 TAF1P21675 1872 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms