RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 RPP25Q9BUL9 199 aaKnown RBP8.23□□□□□ -1.09
CPNE3-209ENST00000620393 PLA2G2FQ9BZM2 168 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 MAGEH1Q9H213 219 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 USP29Q9HBJ7 922 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 MARK1Q9P0L2 795 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 AMACRQ9UHK6 382 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 ZNF148Q9UQR1 794 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 NOTCH4Q99466 2003 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 ZNF638Q14966 1978 aaKnown RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 CFAP69A5D8W1 941 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 FAM187AA6NFU0 413 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 ARHGAP42A6NI28 874 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 H0Y626 953 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 PPP1R12AO14974 1030 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 RAMP2O60895 175 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 ZNF189O75820 626 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 MAP3K6O95382 1288 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 PENKP01210 267 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 RHOCP08134 193 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 CCNCP24863 283 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 HOXD9P28356 352 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 GARSP41250 739 aaKnown RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 PAPOLAP51003 745 aaKnown RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 OXCT1P55809 520 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 GNA12Q03113 381 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 GAD2Q05329 585 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 HTR4Q13639 388 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 DHX34Q14147 1143 aaKnown RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 POLD3Q15054 466 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 SMAD2Q15796 467 aaKnown RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 PUS10Q3MIT2 529 aaKnown RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 PARP15Q460N3 678 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 SLC45A4Q5BKX6 768 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 FSCBQ5H9T9 825 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 CXorf57Q6NSI4 855 aaKnown RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 THSD4Q6ZMP0 1018 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 SYDE1Q6ZW31 735 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 LAPTM4BQ86VI4 370 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 CDKL3Q8IVW4 592 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 CCDC117Q8IWD4 279 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 YAF2Q8IY57 180 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 CARNMT1Q8N4J0 409 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 CCDC33Q8N5R6 958 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 ZNF557Q8N988 423 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 NETO2Q8NC67 525 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 CCNYQ8ND76 341 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 ST13P5Q8NFI4 369 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 GRK7Q8WTQ7 553 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 DEPDC1BQ8WUY9 529 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 FGF14Q92915 247 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 ARHGEF2Q92974 986 aaKnown RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 NXPE3Q969Y0 559 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 HDAC11Q96DB2 347 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 ALG14Q96F25 216 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 HMCESQ96FZ2 354 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 LGMNQ99538 433 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 FEM1AQ9BSK4 669 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 TMEM121Q9BTD3 319 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 LRRC1Q9BTT6 524 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 TRMT61BQ9BVS5 477 aaKnown RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 PHF7Q9BWX1 381 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 SLC2A11Q9BYW1 496 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 C10orf88Q9H8K7 445 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 KIAA1522Q9P206 1035 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 IPO11Q9UI26 975 aaKnown RBP8.22□□□□□ -1.09
CPNE3-209ENST00000620393 FBXO10Q9UK96 956 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 NEU2Q9Y3R4 380 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 DOCK6Q96HP0 2047 aa8.22□□□□□ -1.09
CPNE3-209ENST00000620393 A0A0D9SEW6 157 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 C2CD4DB7Z1M9 353 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 DFFAO00273 331 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 CHADO15335 359 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 HOXC11O43248 304 aaPredicted RBP8.21□□□□□ -1.1
CPNE3-209ENST00000620393 RAD51CO43502 376 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 KDELR3O43731 214 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 MAFKO60675 156 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 NFATC1O95644 943 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 ECEL1O95672 775 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 ADH1CP00326 375 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 TYRP14679 529 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 ARSAP15289 507 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 RBL1P28749 1068 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 GDI1P31150 447 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 ACVRL1P37023 503 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 ETFBP38117 255 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 PLK1P53350 603 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 MRPS25P82663 173 aaKnown RBP8.21□□□□□ -1.1
CPNE3-209ENST00000620393 DR1Q01658 176 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 PPIDQ08752 370 aaKnown RBP8.21□□□□□ -1.1
CPNE3-209ENST00000620393 AP1B1Q10567 949 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 NR1H3Q13133 447 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 SERINC3Q13530 473 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 SLC12A1Q13621 1099 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 CDH18Q13634 790 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 RUNX3Q13761 415 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 PRKD1Q15139 912 aaPredicted RBP8.21□□□□□ -1.1
CPNE3-209ENST00000620393 ANO4Q32M45 955 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 RNF219Q5W0B1 726 aaPredicted RBP8.21□□□□□ -1.1
CPNE3-209ENST00000620393 TRIM68Q6AZZ1 485 aa8.21□□□□□ -1.1
CPNE3-209ENST00000620393 CCDC70Q6NSX1 233 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms