RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 GPS2Q13227 327 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 CAMK2GQ13555 558 aaPredicted RBP8.86□□□□□ -0.99
GPC6-202ENST00000617456 CNGA2Q16280 664 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 PKDCCQ504Y2 493 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 ZNF394Q53GI3 561 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 HES3Q5TGS1 186 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 TCERG1LQ5VWI1 586 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 TTC19Q6DKK2 380 aaPredicted RBP8.86□□□□□ -0.99
GPC6-202ENST00000617456 LCLAT1Q6UWP7 414 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 CHST9Q7L1S5 443 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 BEND5Q7L4P6 421 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 ENOSF1Q7L5Y1 443 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 PIGZQ86VD9 579 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 C10orf67Q8IYJ2 551 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 SMYD4Q8IYR2 804 aaPredicted RBP8.86□□□□□ -0.99
GPC6-202ENST00000617456 ZNF843Q8N446 348 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 EID2Q8N6I1 236 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 UBR7Q8N806 425 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 IRGQQ8WZA9 623 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 BAP1Q92560 729 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 AZIN2Q96A70 460 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 PLD4Q96BZ4 506 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 HSFY1Q96LI6 401 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 SLC6A18Q96N87 628 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 GBP4Q96PP9 640 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 TRIM62Q9BVG3 475 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 ACE2Q9BYF1 805 aaPredicted RBP8.86□□□□□ -0.99
GPC6-202ENST00000617456 OSGEPQ9NPF4 335 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 ABCC13Q9NSE7 274 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 MARCH2Q9P0N8 246 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 PLA2G4CQ9UP65 541 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 CNTN6Q9UQ52 1028 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 TMEM98Q9Y2Y6 226 aa8.86□□□□□ -0.99
GPC6-202ENST00000617456 RRP15Q9Y3B9 282 aaKnown RBP8.86□□□□□ -0.99
GPC6-202ENST00000617456 HBS1LQ9Y450 684 aaKnown RBP8.86□□□□□ -0.99
GPC6-202ENST00000617456 A0A1B0GTQ1 180 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 PPP1R3GB7ZBB8 358 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 PDLIM1O00151 329 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 O00370 1275 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 CAPN9O14815 690 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 SART1O43290 800 aaKnown RBP8.85□□□□□ -0.99
GPC6-202ENST00000617456 DFNA5O60443 496 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 ERLIN1O75477 346 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 IVLP07476 585 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 ZNF24P17028 368 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 HLA-FP30511 346 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 RPL34P49207 117 aaKnown RBP8.85□□□□□ -0.99
GPC6-202ENST00000617456 HARS2P49590 506 aaKnown RBP8.85□□□□□ -0.99
GPC6-202ENST00000617456 TKTL1P51854 596 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 PMS1P54277 932 aaKnown RBP8.85□□□□□ -0.99
GPC6-202ENST00000617456 YWHAGP61981 247 aaKnown RBP eCLIP8.85□□□□□ -0.99
GPC6-202ENST00000617456 CXADRP78310 365 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 MORC3Q14149 939 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 TRIP4Q15650 581 aaPredicted RBP8.85□□□□□ -0.99
GPC6-202ENST00000617456 DCAF17Q5H9S7 520 aaPredicted RBP8.85□□□□□ -0.99
GPC6-202ENST00000617456 MPP7Q5T2T1 576 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 KIAA0895LQ68EN5 471 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 TTI2Q6NXR4 508 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 GPR155Q7Z3F1 870 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 MYLK4Q86YV6 388 aaPredicted RBP8.85□□□□□ -0.99
GPC6-202ENST00000617456 TRIM59Q8IWR1 403 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 PHC3Q8NDX5 983 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 WFIKKN2Q8TEU8 576 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 STK32AQ8WU08 396 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 SLC35F5Q8WV83 523 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 GIMAP1Q8WWP7 306 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 NT5C1BQ96P26 610 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 ELF4Q99607 663 aaPredicted RBP8.85□□□□□ -0.99
GPC6-202ENST00000617456 BAG1Q99933 345 aaPredicted RBP8.85□□□□□ -0.99
GPC6-202ENST00000617456 ORAI3Q9BRQ5 295 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 TMEM245Q9H330 911 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 MTG2Q9H4K7 406 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 LRRC4Q9HBW1 653 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 SGK2Q9HBY8 427 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 PRSS16Q9NQE7 514 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 AASDHPPTQ9NRN7 309 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 ABCB8Q9NUT2 735 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 TSPAN16Q9UKR8 245 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 PCDHGA1Q9Y5H4 931 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 TENM4Q6N022 2769 aa8.85□□□□□ -0.99
GPC6-202ENST00000617456 SPTA1P02549 2419 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 MYO18BQ8IUG5 2567 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 MGAQ8IWI9 3026 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 CYSRT1A8MQ03 144 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 J3QKU1 62 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 VILLO15195 856 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 IRAK2O43187 625 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 BRINP1O60477 761 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 FBXO21O94952 628 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 WNT1P04628 370 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 IGHV4-34P06331 123 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 PABPC1P11940 636 aaKnown RBP8.84□□□□□ -0.99
GPC6-202ENST00000617456 HOXD9P28356 352 aaPredicted RBP8.84□□□□□ -0.99
GPC6-202ENST00000617456 ACADVLP49748 655 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 RACK1P63244 317 aaKnown RBP8.84□□□□□ -0.99
GPC6-202ENST00000617456 CFHR1Q03591 330 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 NNTQ13423 1086 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 SHBQ15464 509 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 MPPE1Q53F39 396 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 TAF1BQ53T94 588 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms