RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 TTC27Q6P3X3 843 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 CCDC137Q6PK04 289 aaKnown RBP11.75□□□□□ -0.53
SLIRP-212ENST00000613856 TMCO3Q6UWJ1 677 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 LRRC31Q6UY01 552 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 TPRG1Q6ZUI0 275 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 HTR3DQ70Z44 454 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 BZW1Q7L1Q6 419 aaKnown RBP11.75□□□□□ -0.53
SLIRP-212ENST00000613856 C14orf80Q86SX3 495 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 CHSY1Q86X52 802 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 KLHL7Q8IXQ5 586 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 CCDC26Q8TAB7 109 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 C1orf54Q8WWF1 131 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 ATG4AQ8WYN0 398 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 UBXN4Q92575 508 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 P3H4Q92791 437 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 OLFM3Q96PB7 478 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 CYP2S1Q96SQ9 504 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 RTKNQ9BST9 563 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 SIK2Q9H0K1 926 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 KIF9Q9HAQ2 790 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 GKN1Q9NS71 199 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 ETNK2Q9NVF9 386 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 ZSCAN32Q9NX65 697 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 SMPD4Q9NXE4 827 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 DONSONQ9NYP3 566 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 AGO1Q9UL18 857 aaKnown RBP11.75□□□□□ -0.53
SLIRP-212ENST00000613856 DRG1Q9Y295 367 aaKnown RBP11.75□□□□□ -0.53
SLIRP-212ENST00000613856 NYNRINQ9P2P1 1898 aaKnown RBP11.74□□□□□ -0.53
SLIRP-212ENST00000613856 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-212ENST00000613856 E2F8A0AVK6 867 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 TARSL2A2RTX5 802 aaKnown RBP11.74□□□□□ -0.53
SLIRP-212ENST00000613856 FAM187AA6NFU0 413 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 LEFTY2O00292 366 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 GFRA2O00451 464 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 ITGAVP06756 1048 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 IRF1P10914 325 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 RHOQP17081 205 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 KCNA4P22459 653 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 ZXDBP98169 803 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 GBE1Q04446 702 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 SRSF5Q13243 272 aaKnown RBP11.74□□□□□ -0.53
SLIRP-212ENST00000613856 BYSLQ13895 437 aaKnown RBP11.74□□□□□ -0.53
SLIRP-212ENST00000613856 RABGAP1LQ5R372 815 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 ADGRF1Q5T601 910 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 TTC39BQ5VTQ0 682 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-212ENST00000613856 FBXL22Q6P050 247 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 SYDE1Q6ZW31 735 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-212ENST00000613856 MAATS1Q7Z4T9 603 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 NLRP14Q86W24 1093 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 DENND1CQ8IV53 801 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 LZTR1Q8N653 840 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 RTL3Q8N8U3 475 aaKnown RBP11.74□□□□□ -0.53
SLIRP-212ENST00000613856 GRK7Q8WTQ7 553 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 WBP2Q969T9 261 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 HAUS1Q96CS2 278 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 ZYG11BQ9C0D3 744 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 PRMT8Q9NR22 394 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-212ENST00000613856 HEBP1Q9NRV9 189 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 TMEM248Q9NWD8 314 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 DTLQ9NZJ0 730 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 CFAP97Q9P2B7 532 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 ZNF212Q9UDV6 495 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 FEZ2Q9UHY8 353 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-212ENST00000613856 DNPEPQ9ULA0 475 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 VANGL2Q9ULK5 521 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 SH3BP1Q9Y3L3 701 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 SPEGQ15772 3267 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 SHROOM3Q8TF72 1996 aa11.74□□□□□ -0.53
SLIRP-212ENST00000613856 CFAP69A5D8W1 941 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 HACD1B0YJ81 288 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 NCAM2O15394 837 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 RAD51CO43502 376 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 PRAMEF12O95522 483 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 ECEL1O95672 775 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 SLC6A4P31645 630 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 PTGIRP43119 386 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 MAPKAPK2P49137 400 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 EIF3EP60228 445 aaKnown RBP11.73□□□□□ -0.53
SLIRP-212ENST00000613856 DR1Q01658 176 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 DMWDQ09019 674 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 PDK1Q15118 436 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 ZNF77Q15935 545 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 AFMIDQ63HM1 303 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 RWDD4Q6NW29 188 aaKnown RBP11.73□□□□□ -0.53
SLIRP-212ENST00000613856 C1orf228Q6PIY5 440 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 NPNTQ6UXI9 565 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 CHST9Q7L1S5 443 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 CDKL3Q8IVW4 592 aaPredicted RBP11.73□□□□□ -0.53
SLIRP-212ENST00000613856 NPAS3Q8IXF0 933 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 LGI2Q8N0V4 545 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 ZNF687Q8N1G0 1237 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 CPXM2Q8N436 756 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 NPWQ8N729 165 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 ATL2Q8NHH9 583 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 SH3RF2Q8TEC5 729 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 USP13Q92995 863 aaPredicted RBP11.73□□□□□ -0.53
SLIRP-212ENST00000613856 IGSF8Q969P0 613 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 CLDN23Q96B33 292 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 SHDQ96IW2 340 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 PRICKLE1Q96MT3 831 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms