RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 PARP15Q460N3 678 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 CCDC13Q8IYE1 715 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 TAB3Q8N5C8 712 aaPredicted RBP17.96■□□□□ 0.47
SREK1-216ENST00000612404 OR52K2Q8NGK3 314 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 CCHCR1Q8TD31 782 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 BPIFB1Q8TDL5 484 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 PPM1EQ8WY54 764 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 CEP41Q9BYV8 373 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 GDF3Q9NR23 364 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 DUS2Q9NX74 493 aaKnown RBP17.96■□□□□ 0.47
SREK1-216ENST00000612404 DOCK8Q8NF50 2099 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 A0A0D9SEW6 157 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 HEPACAM2A8MVW5 462 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 RNF103O00237 685 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 LUC7L3O95232 432 aaKnown RBP17.96■□□□□ 0.47
SREK1-216ENST00000612404 ACVRL1P37023 503 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 RPL21P46778 160 aaKnown RBP17.96■□□□□ 0.47
SREK1-216ENST00000612404 YBEYP58557 167 aaPredicted RBP17.96■□□□□ 0.47
SREK1-216ENST00000612404 GNA12Q03113 381 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 SETD3Q86TU7 594 aaPredicted RBP17.96■□□□□ 0.47
SREK1-216ENST00000612404 TMEM25Q86YD3 366 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 MFN1Q8IWA4 741 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 CCDC117Q8IWD4 279 aaPredicted RBP17.96■□□□□ 0.47
SREK1-216ENST00000612404 OTUB2Q96DC9 234 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 TRPV4Q9HBA0 871 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 ZFP14Q9HCL3 533 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 IPO11Q9UI26 975 aaKnown RBP17.96■□□□□ 0.47
SREK1-216ENST00000612404 USP15Q9Y4E8 981 aaPredicted RBP17.96■□□□□ 0.47
SREK1-216ENST00000612404 NYNRINQ9P2P1 1898 aaKnown RBP17.96■□□□□ 0.47
SREK1-216ENST00000612404 MAFKO60675 156 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 CCNCP24863 283 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 MCM3P25205 808 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 HOXD9P28356 352 aaPredicted RBP17.95■□□□□ 0.46
SREK1-216ENST00000612404 RPL22P35268 128 aaKnown RBP17.95■□□□□ 0.46
SREK1-216ENST00000612404 ANO4Q32M45 955 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 P3H1Q32P28 736 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 MPP7Q5T2T1 576 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 IL31Q6EBC2 164 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 TANGO2Q6ICL3 276 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 CXorf57Q6NSI4 855 aaKnown RBP17.95■□□□□ 0.46
SREK1-216ENST00000612404 WDR93Q6P2C0 686 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 LRRC49Q8IUZ0 686 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 CCDC110Q8TBZ0 833 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 RUBCNQ92622 972 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 ARHGEF2Q92974 986 aaKnown RBP17.95■□□□□ 0.46
SREK1-216ENST00000612404 IRF7Q92985 503 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 RTP4Q96DX8 246 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 NECTIN4Q96NY8 510 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 TSGA13Q96PP4 275 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 MUC3BQ9H195 1237 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 MAGEH1Q9H213 219 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 SPHK2Q9NRA0 654 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 TBC1D30Q9Y2I9 924 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 MYOFQ9NZM1 2061 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 ILVBLA1L0T0 632 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 NEDD8-MDP1E9PL57 170 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 LAMP2P13473 410 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 KCNA5P22460 613 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 SP100P23497 879 aaPredicted RBP17.95■□□□□ 0.46
SREK1-216ENST00000612404 FCARP24071 287 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 IFNAR2P48551 515 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 CARSP49589 748 aaKnown RBP17.95■□□□□ 0.46
SREK1-216ENST00000612404 CLCN6P51797 869 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 HLTFQ14527 1009 aaKnown RBP eCLIP17.95■□□□□ 0.46
SREK1-216ENST00000612404 FSCBQ5H9T9 825 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 RNF219Q5W0B1 726 aaPredicted RBP17.95■□□□□ 0.46
SREK1-216ENST00000612404 ADGRG2Q8IZP9 1017 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 OR7D4Q8NG98 312 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 SNF8Q96H20 258 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 SPON2Q9BUD6 331 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 BBS2Q9BXC9 721 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 SP110Q9HB58 689 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 FAM114A2Q9NRY5 505 aa17.95■□□□□ 0.46
SREK1-216ENST00000612404 MTSS1O43312 755 aa17.94■□□□□ 0.46
SREK1-216ENST00000612404 ZNF189O75820 626 aaPredicted RBP17.94■□□□□ 0.46
SREK1-216ENST00000612404 TUBBP07437 444 aa17.94■□□□□ 0.46
SREK1-216ENST00000612404 FOSL2P15408 326 aa17.94■□□□□ 0.46
SREK1-216ENST00000612404 ZNF33AQ06730 810 aa17.94■□□□□ 0.46
SREK1-216ENST00000612404 SERINC3Q13530 473 aa17.94■□□□□ 0.46
SREK1-216ENST00000612404 LY6G5CQ5SRR4 150 aa17.94■□□□□ 0.46
SREK1-216ENST00000612404 FYB2Q5VWT5 728 aa17.94■□□□□ 0.46
SREK1-216ENST00000612404 TRIM68Q6AZZ1 485 aa17.94■□□□□ 0.46
SREK1-216ENST00000612404 TIGD7Q6NT04 549 aaPredicted RBP17.94■□□□□ 0.46
SREK1-216ENST00000612404 ARHGEF18Q6ZSZ5 1173 aa17.94■□□□□ 0.46
SREK1-216ENST00000612404 DEFB123Q8N688 67 aa17.94■□□□□ 0.46
SREK1-216ENST00000612404 WFDC5Q8TCV5 224 aa17.94■□□□□ 0.46
SREK1-216ENST00000612404 OSCP1Q8WVF1 389 aa17.94■□□□□ 0.46
SREK1-216ENST00000612404 SEC14L1Q92503 715 aa17.94■□□□□ 0.46
SREK1-216ENST00000612404 ZFYVE19Q96K21 471 aa17.94■□□□□ 0.46
SREK1-216ENST00000612404 THG1LQ9NWX6 298 aaKnown RBP17.94■□□□□ 0.46
SREK1-216ENST00000612404 OBP2AQ9NY56 170 aa17.94■□□□□ 0.46
SREK1-216ENST00000612404 C5orf60A6NFR6 353 aa17.93■□□□□ 0.46
SREK1-216ENST00000612404 J3KR12 359 aa17.93■□□□□ 0.46
SREK1-216ENST00000612404 GCATO75600 419 aa17.93■□□□□ 0.46
SREK1-216ENST00000612404 WASHC5Q12768 1159 aa17.93■□□□□ 0.46
SREK1-216ENST00000612404 CALCOCO2Q13137 446 aa17.93■□□□□ 0.46
SREK1-216ENST00000612404 CUL1Q13616 776 aa17.93■□□□□ 0.46
SREK1-216ENST00000612404 ANKRD20A2Q5SQ80 823 aa17.93■□□□□ 0.46
SREK1-216ENST00000612404 ANKRD20A1Q5TYW2 823 aa17.93■□□□□ 0.46
SREK1-216ENST00000612404 ANKRD20A3Q5VUR7 823 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms