RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 YWHAZP63104 245 aaKnown RBP13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 CDK17Q00537 523 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 PAK1Q13153 545 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 NME3Q13232 169 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 PDCLQ13371 301 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 ARHGAP44Q17R89 818 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 C6orf118Q5T5N4 469 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 NAPEPLDQ6IQ20 393 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 Q6ZVU0 165 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 DSG4Q86SJ6 1040 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 PRPF39Q86UA1 669 aaKnown RBP13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 TMPRSS12Q86WS5 348 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 TRIM59Q8IWR1 403 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 SAP25Q8TEE9 199 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 BBC3Q96PG8 261 aaPredicted RBP13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 SPAG5Q96R06 1193 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 MED15Q96RN5 788 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 SLC4A5Q9BY07 1137 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 THAP9Q9H5L6 903 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 SCUBE2Q9NQ36 999 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 DKK4Q9UBT3 224 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 VPS28Q9UK41 221 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 VANGL2Q9ULK5 521 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 CA5BQ9Y2D0 317 aa13.76□□□□□ -0.21
HMGB1P24-201ENST00000611897 GCN1Q92616 2671 aaKnown RBP13.75□□□□□ -0.21
HMGB1P24-201ENST00000611897 KCNU1A8MYU2 1149 aa13.75□□□□□ -0.21
HMGB1P24-201ENST00000611897 PMM2O15305 246 aa13.75□□□□□ -0.21
HMGB1P24-201ENST00000611897 YKT6O15498 198 aa13.75□□□□□ -0.21
HMGB1P24-201ENST00000611897 ACADVLP49748 655 aa13.75□□□□□ -0.21
HMGB1P24-201ENST00000611897 IRAK1P51617 712 aa13.75□□□□□ -0.21
HMGB1P24-201ENST00000611897 ARID5BQ14865 1188 aa13.75□□□□□ -0.21
HMGB1P24-201ENST00000611897 CXorf57Q6NSI4 855 aaKnown RBP13.75□□□□□ -0.21
HMGB1P24-201ENST00000611897 DEFB106AQ8N104 65 aa13.75□□□□□ -0.21
HMGB1P24-201ENST00000611897 ZNF606Q8WXB4 792 aa13.75□□□□□ -0.21
HMGB1P24-201ENST00000611897 KLK6Q92876 244 aa13.75□□□□□ -0.21
HMGB1P24-201ENST00000611897 TIGD1Q96MW7 591 aa13.75□□□□□ -0.21
HMGB1P24-201ENST00000611897 SRRTQ9BXP5 876 aaKnown RBP13.75□□□□□ -0.21
HMGB1P24-201ENST00000611897 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.75□□□□□ -0.21
HMGB1P24-201ENST00000611897 PTPRQQ9UMZ3 2332 aa13.75□□□□□ -0.21
HMGB1P24-201ENST00000611897 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 PPP1R3GB7ZBB8 358 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 C1QTNF3-AMACRE9PGA6 284 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 PRLRP16471 622 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 BMP6P22004 513 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 ITPKBP27987 946 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 CCR1P32246 355 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 APBA1Q02410 837 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 SULT2A1Q06520 285 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 CNTN1Q12860 1018 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 TARDBPQ13148 414 aaKnown RBP eCLIP13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 ZNF177Q13360 481 aaPredicted RBP13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 SLC12A1Q13621 1099 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 TTC39BQ5VTQ0 682 aaPredicted RBP13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 OR6B2Q6IFH4 312 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 FBXL22Q6P050 247 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 SPATS2Q86XZ4 545 aaKnown RBP13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 OXR1Q8N573 874 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 CPXM1Q96SM3 734 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 SIK2Q9H0K1 926 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 MUC3BQ9H195 1237 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 SYNCQ9H7C4 482 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 SARDHQ9UL12 918 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 PCDHGA1Q9Y5H4 931 aa13.74□□□□□ -0.21
HMGB1P24-201ENST00000611897 SLC31A1O15431 190 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 FFAR2O15552 330 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 LATO43561 262 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 GNA14O95837 355 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 IGLV3-25P01717 112 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 SLC2A3P11169 496 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 RPL34P49207 117 aaKnown RBP13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 DAB2P98082 770 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 STAT4Q14765 748 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 DLG2Q15700 870 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 SETMARQ53H47 684 aaPredicted RBP13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 FAM46CQ5VWP2 391 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 LRRC69Q6ZNQ3 347 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 FAM183BPQ6ZVS7 135 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 BEND5Q7L4P6 421 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 C1orf131Q8NDD1 294 aaKnown RBP13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 OR52K2Q8NGK3 314 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 STK32AQ8WU08 396 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 FRS2Q8WU20 508 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 PRMT1Q99873 361 aaKnown RBP13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 FZD3Q9NPG1 666 aa13.73□□□□□ -0.21
HMGB1P24-201ENST00000611897 A0A087WV48 116 aa13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 BECN2A8MW95 431 aa13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 KPNA3O00505 521 aaPredicted RBP13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 PLRG1O43660 514 aaKnown RBP13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 HSF2BPO75031 334 aa13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 PRB1P04280 392 aa13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 OXCT1P55809 520 aa13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 AUHQ13825 339 aaKnown RBP13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 MORC3Q14149 939 aa13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 AGBL4Q5VU57 503 aa13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 TRIM65Q6PJ69 517 aa13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 KDM7AQ6ZMT4 941 aa13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 TMEM110Q86TL2 294 aa13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 MFSD2AQ8NA29 543 aa13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 GRIN3AQ8TCU5 1115 aa13.72□□□□□ -0.21
HMGB1P24-201ENST00000611897 PPP1R13BQ96KQ4 1090 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms