RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 CA4P22748 312 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 PMLP29590 882 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 CCL23P55773 120 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 MAP3K7CLP57077 242 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 DSC3Q14574 896 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 EFTUD2Q15029 972 aaKnown RBP eCLIP16.33■□□□□ 0.2
RTN1-209ENST00000611068 TMCO4Q5TGY1 634 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 RHBDF2Q6PJF5 856 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 TRAF7Q6Q0C0 670 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 CCDC110Q8TBZ0 833 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 LINC01599Q8WXQ3 324 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 MTBPQ96DY7 904 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 KCNK16Q96T55 309 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 CGREF1Q99674 301 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 TUBB6Q9BUF5 446 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 BEGAINQ9BUH8 593 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 OSBPL8Q9BZF1 889 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 C12orf65Q9H3J6 166 aaKnown RBP16.33■□□□□ 0.2
RTN1-209ENST00000611068 TRABDQ9H4I3 376 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 S100A14Q9HCY8 104 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 NGRNQ9NPE2 291 aaKnown RBP16.33■□□□□ 0.2
RTN1-209ENST00000611068 AK5Q9Y6K8 562 aa16.33■□□□□ 0.2
RTN1-209ENST00000611068 S100A1P23297 94 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 PDE1CQ14123 709 aaPredicted RBP16.32■□□□□ 0.2
RTN1-209ENST00000611068 PKN2Q16513 984 aaKnown RBP16.32■□□□□ 0.2
RTN1-209ENST00000611068 UPP1Q16831 310 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 PKDCCQ504Y2 493 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 DCAF6Q58WW2 860 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 TMEM209Q96SK2 561 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 MTUS1Q9ULD2 1270 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 PLA2G4CQ9UP65 541 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 PTPN1P18031 435 aaKnown RBP16.32■□□□□ 0.2
RTN1-209ENST00000611068 MIPP30301 263 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 LRPAP1P30533 357 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 PIGHQ14442 188 aaPredicted RBP16.32■□□□□ 0.2
RTN1-209ENST00000611068 IYDQ6PHW0 289 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 POTEHQ6S545 545 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 TMCO5AQ8N6Q1 288 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 POU5F2Q8N7G0 328 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 LRRN4Q8WUT4 740 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 MCRS1Q96EZ8 462 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 KCNK13Q9HB14 408 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 ALG13Q9NP73 1137 aaKnown RBP16.32■□□□□ 0.2
RTN1-209ENST00000611068 CRTAC1Q9NQ79 661 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 SLC38A7Q9NVC3 462 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 PRG3Q9Y2Y8 225 aaPredicted RBP16.32■□□□□ 0.2
RTN1-209ENST00000611068 RALGAPA2Q2PPJ7 1873 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 A0A1B0GTW7 788 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 TM7SF2O76062 418 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 ENO1P06733 434 aaKnown RBP16.32■□□□□ 0.2
RTN1-209ENST00000611068 PBX3P40426 434 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 FAM209AQ5JX71 171 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 LVRNQ6Q4G3 990 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 UNC93AQ86WB7 457 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 ALDH16A1Q8IZ83 802 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 TAB3Q8N5C8 712 aaPredicted RBP16.32■□□□□ 0.2
RTN1-209ENST00000611068 DBF4BQ8NFT6 615 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 NSMCE3Q96MG7 304 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 PRPF18Q99633 342 aaKnown RBP16.32■□□□□ 0.2
RTN1-209ENST00000611068 TMEM120AQ9BXJ8 343 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 NMUR2Q9GZQ4 415 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 TMEM30AQ9NV96 361 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 RRN3Q9NYV6 651 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 KIAA1257Q9ULG3 409 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 MAD1L1Q9Y6D9 718 aa16.32■□□□□ 0.2
RTN1-209ENST00000611068 CAPN8A6NHC0 703 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 FCHO1O14526 889 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 PSTPIP1O43586 416 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 NBNO60934 754 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 DDHD2O94830 711 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 MAP3K6O95382 1288 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 OCM2P0CE71 109 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 OCMP0CE72 109 aaPredicted RBP16.31■□□□□ 0.2
RTN1-209ENST00000611068 MMRN1Q13201 1228 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 TRIP10Q15642 601 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 C6orf163Q5TEZ5 329 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 DCDC5Q6ZRR9 648 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 PAQR9Q6ZVX9 377 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 ZNF398Q8TD17 642 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 PYROXD1Q8WU10 500 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 MRRFQ96E11 262 aaKnown RBP16.31■□□□□ 0.2
RTN1-209ENST00000611068 SLITRK1Q96PX8 696 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 PEBP4Q96S96 227 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 CALN1Q9BXU9 219 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 K7EPI3 171 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 FSCN2O14926 492 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 RBP3P10745 1247 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 MYCLP1P12525 358 aaPredicted RBP16.31■□□□□ 0.2
RTN1-209ENST00000611068 GCAP28676 217 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 GABRB2P47870 512 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 CDK16Q00536 496 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 MYBPC1Q00872 1141 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 NSUN2Q08J23 767 aaKnown RBP eCLIP16.31■□□□□ 0.2
RTN1-209ENST00000611068 ADIGQ0VDE8 80 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 KRT72Q14CN4 511 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 TCTN1Q2MV58 587 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 PPP1R2P3Q6NXS1 205 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 LRRC8DQ7L1W4 858 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 VASH1Q7L8A9 365 aaPredicted RBP16.31■□□□□ 0.2
RTN1-209ENST00000611068 DEFB128Q7Z7B8 93 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms