RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 PRDM8Q9NQV8 689 aa4.84□□□□□ -1.63
HDDC2-207ENST00000608532 HMX3A6NHT5 357 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 LACTBL1A8MY62 500 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 CSTBP04080 98 aaKnown RBP4.83□□□□□ -1.64
HDDC2-207ENST00000608532 CYP1A2P05177 515 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 PKMP14618 531 aaKnown RBP4.83□□□□□ -1.64
HDDC2-207ENST00000608532 HOXB9P17482 250 aaPredicted RBP4.83□□□□□ -1.64
HDDC2-207ENST00000608532 GSTM2P28161 218 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 HOXA11P31270 313 aaPredicted RBP4.83□□□□□ -1.64
HDDC2-207ENST00000608532 ARRB2P32121 409 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 CCKBRP32239 447 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 SLC16A2P36021 539 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 KCNJ4P48050 445 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 CYP2J2P51589 502 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 PNLIPRP1P54315 467 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 RHAGQ02094 409 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 CHAF1AQ13111 956 aaPredicted RBP4.83□□□□□ -1.64
HDDC2-207ENST00000608532 ALKBH1Q13686 389 aaKnown RBP4.83□□□□□ -1.64
HDDC2-207ENST00000608532 BLMHQ13867 455 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 TIGD6Q17RP2 521 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 CCDC38Q502W7 563 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 LRRC24Q50LG9 513 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 SLC16A12Q6ZSM3 486 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 Q6ZTK2 550 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 MEPCEQ7L2J0 689 aaKnown RBP4.83□□□□□ -1.64
HDDC2-207ENST00000608532 RNF144BQ7Z419 303 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 FAM217AQ8IXS0 508 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 DPP10Q8N608 796 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 ARRDC3Q96B67 414 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 PIGSQ96S52 555 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 FRMD8Q9BZ67 464 aaPredicted RBP4.83□□□□□ -1.64
HDDC2-207ENST00000608532 PNRC2Q9NPJ4 139 aaKnown RBP4.83□□□□□ -1.64
HDDC2-207ENST00000608532 KCND3Q9UK17 655 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 RCE1Q9Y256 329 aa4.83□□□□□ -1.64
HDDC2-207ENST00000608532 SYN3O14994 580 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 KRT38O76015 456 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 LYL1P12980 280 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 CPA1P15085 419 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 OAZ1P54368 228 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 Q5PR19 223 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 TTC22Q5TAA0 569 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 FAM171A1Q5VUB5 890 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 MTFR2Q6P444 385 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 AAGABQ6PD74 315 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 FBXL14Q8N1E6 418 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 LRRC57Q8N9N7 239 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 B4GALNT2Q8NHY0 566 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 LTV1Q96GA3 475 aaPredicted RBP4.82□□□□□ -1.64
HDDC2-207ENST00000608532 CLPBQ9H078 707 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 MYLK2Q9H1R3 596 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 ACAD9Q9H845 621 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 ACTR5Q9H9F9 607 aaPredicted RBP4.82□□□□□ -1.64
HDDC2-207ENST00000608532 NCKIPSDQ9NZQ3 722 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 NDUFAF4Q9P032 175 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 TAGLN3Q9UI15 199 aa4.82□□□□□ -1.64
HDDC2-207ENST00000608532 CCDC194A0A1B0GVG4 234 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 KLKB1P03952 638 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 CYP21A2P08686 494 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 TYK2P29597 1187 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 MLH1P40692 756 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 ENTPD1P49961 510 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 ERV3-1Q14264 604 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 GPR18Q14330 331 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 ZNF585BQ52M93 769 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 DGAT2L7PQ6IED9 249 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 SYT13Q7L8C5 426 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.81□□□□□ -1.64
HDDC2-207ENST00000608532 CAMK1DQ8IU85 385 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 FAM185AQ8N0U4 392 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 SPICE1Q8N0Z3 855 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 RUBCNQ92622 972 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 GOLGA1Q92805 767 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 ZNF479Q96JC4 524 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 TMEM204Q9BSN7 226 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 POLDIP3Q9BY77 421 aaKnown RBP4.81□□□□□ -1.64
HDDC2-207ENST00000608532 HIPK3Q9H422 1215 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 TAF1DQ9H5J8 278 aaPredicted RBP4.81□□□□□ -1.64
HDDC2-207ENST00000608532 KRCC1Q9NPI7 259 aaPredicted RBP4.81□□□□□ -1.64
HDDC2-207ENST00000608532 HIF1ANQ9NWT6 349 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 GRHPRQ9UBQ7 328 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 RAP2CQ9Y3L5 183 aa4.81□□□□□ -1.64
HDDC2-207ENST00000608532 GAGE12JA6NER3 117 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 NPIPB13A6NJU9 1138 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 NPIPB5A8MRT5 1133 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 NPIPB4C9JG80 1138 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 NGFRP08138 427 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 TNFSF8P32971 234 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 CDK7P50613 346 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 GXYLT1Q4G148 440 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 CCDC174Q6PII3 467 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 RINLQ6ZS11 566 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 SLC2A12Q8TD20 617 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 CSGALNACT1Q8TDX6 532 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 NPAS1Q99742 590 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 NTPCRQ9BSD7 190 aaKnown RBP4.8□□□□□ -1.64
HDDC2-207ENST00000608532 ARHGAP39Q9C0H5 1083 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 B3GNT4Q9C0J1 378 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 ABHD16BQ9H3Z7 469 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 Q9N2J8 555 aa4.8□□□□□ -1.64
HDDC2-207ENST00000608532 TMEM248Q9NWD8 314 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms