RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 PNKPQ96T60 521 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 VAT1Q99536 393 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 FERMT1Q9BQL6 677 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 UBE2ZQ9H832 354 aaPredicted RBP16.9■□□□□ 0.3
PMF1-206ENST00000606952 ZFP14Q9HCL3 533 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 SPHK2Q9NRA0 654 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 UTP11Q9Y3A2 253 aaKnown RBP16.9■□□□□ 0.3
PMF1-206ENST00000606952 OR51B4Q9Y5P0 310 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 KIAA1549LQ6ZVL6 1849 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 MYOFQ9NZM1 2061 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 A0A0A0MRY4 1105 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 HEPACAM2A8MVW5 462 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 SCAMP3O14828 347 aaKnown RBP16.89■□□□□ 0.29
PMF1-206ENST00000606952 MATN3O15232 486 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 KCNN4O15554 427 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 HOXC11O43248 304 aaPredicted RBP16.89■□□□□ 0.29
PMF1-206ENST00000606952 TSPAN3O60637 253 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 ECI2O75521 394 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 PEX11BO96011 259 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 RHOCP08134 193 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 FOSL2P15408 326 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 VIPR2P41587 438 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 PAPOLAP51003 745 aaKnown RBP16.89■□□□□ 0.29
PMF1-206ENST00000606952 PLK1P53350 603 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 SLC7A5Q01650 507 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 IL10RBQ08334 325 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 WASHC5Q12768 1159 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 CUL1Q13616 776 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 POLD3Q15054 466 aaPredicted RBP16.89■□□□□ 0.29
PMF1-206ENST00000606952 PDGFRLQ15198 375 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 PPP1R7Q15435 360 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 EML3Q32P44 896 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 MFSD6LQ8IWD5 586 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 IFT20Q8IY31 132 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 FAM71DQ8N9W8 422 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 GLIS1Q8NBF1 620 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 OR52K2Q8NGK3 314 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 FIBINQ8TAL6 211 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 DEPDC1BQ8WUY9 529 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.89■□□□□ 0.29
PMF1-206ENST00000606952 ALG14Q96F25 216 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 SPATA13Q96N96 652 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 IL12RB2Q99665 862 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 FAM83CQ9BQN1 747 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 ACE2Q9BYF1 805 aaPredicted RBP16.89■□□□□ 0.29
PMF1-206ENST00000606952 PDFQ9HBH1 243 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 FAM114A2Q9NRY5 505 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 WHRNQ9P202 907 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 IPO11Q9UI26 975 aaKnown RBP16.89■□□□□ 0.29
PMF1-206ENST00000606952 WNT6Q9Y6F9 365 aa16.89■□□□□ 0.29
PMF1-206ENST00000606952 COL4A2P08572 1712 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 UQCRHLA0A096LP55 91 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 GRXCR2A6NFK2 248 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 ZSCAN5CA6NGD5 496 aaPredicted RBP16.88■□□□□ 0.29
PMF1-206ENST00000606952 ANHXE9PGG2 379 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 DFFAO00273 331 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 NDC80O14777 642 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 PRAMEF11O60813 436 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 OPHN1O60890 802 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 UQCRHP07919 91 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 MCM3P25205 808 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 RPL22P35268 128 aaKnown RBP16.88■□□□□ 0.29
PMF1-206ENST00000606952 CLCN6P51797 869 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 MRPS25P82663 173 aaKnown RBP16.88■□□□□ 0.29
PMF1-206ENST00000606952 GUCY2DQ02846 1103 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 SLC12A1Q13621 1099 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 TANGO2Q6ICL3 276 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 VITQ6UXI7 678 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 OTOP3Q7RTS5 596 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 GSTA5Q7RTV2 222 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 KLHDC8BQ8IXV7 354 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.88■□□□□ 0.29
PMF1-206ENST00000606952 NETO2Q8NC67 525 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 CCNYQ8ND76 341 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 CASKIN2Q8WXE0 1202 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 ASIC4Q96FT7 647 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 ZNF599Q96NL3 588 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 SLC2A11Q9BYW1 496 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 EPC1Q9H2F5 836 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 C10orf88Q9H8K7 445 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 DUS2Q9NX74 493 aaKnown RBP16.88■□□□□ 0.29
PMF1-206ENST00000606952 GRHL1Q9NZI5 618 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 PAK5Q9P286 719 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 FBXO10Q9UK96 956 aa16.88■□□□□ 0.29
PMF1-206ENST00000606952 TP73O15350 636 aa16.87■□□□□ 0.29
PMF1-206ENST00000606952 MBTPS2O43462 519 aa16.87■□□□□ 0.29
PMF1-206ENST00000606952 CACNG3O60359 315 aa16.87■□□□□ 0.29
PMF1-206ENST00000606952 SEC31AO94979 1220 aaKnown RBP16.87■□□□□ 0.29
PMF1-206ENST00000606952 CYP17A1P05093 508 aa16.87■□□□□ 0.29
PMF1-206ENST00000606952 PTPN3P26045 913 aa16.87■□□□□ 0.29
PMF1-206ENST00000606952 MAGEA6P43360 314 aa16.87■□□□□ 0.29
PMF1-206ENST00000606952 RPL21P46778 160 aaKnown RBP16.87■□□□□ 0.29
PMF1-206ENST00000606952 IFNAR2P48551 515 aa16.87■□□□□ 0.29
PMF1-206ENST00000606952 AP1B1Q10567 949 aa16.87■□□□□ 0.29
PMF1-206ENST00000606952 HNRNPDQ14103 355 aaKnown RBP16.87■□□□□ 0.29
PMF1-206ENST00000606952 ANO4Q32M45 955 aa16.87■□□□□ 0.29
PMF1-206ENST00000606952 RHBDF2Q6PJF5 856 aa16.87■□□□□ 0.29
PMF1-206ENST00000606952 ARHGAP36Q6ZRI8 547 aa16.87■□□□□ 0.29
PMF1-206ENST00000606952 EP400NLQ6ZTU2 488 aa16.87■□□□□ 0.29
PMF1-206ENST00000606952 MTSS1LQ765P7 747 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms