RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CTSOP43234 321 aaPredicted RBP7.87□□□□□ -1.15
MSH6-211ENST00000606499 PAPOLAP51003 745 aaKnown RBP7.87□□□□□ -1.15
MSH6-211ENST00000606499 GALK1P51570 392 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 NDST2P52849 883 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 SLC10A2Q12908 348 aaPredicted RBP7.87□□□□□ -1.15
MSH6-211ENST00000606499 KLF1Q13351 362 aaPredicted RBP7.87□□□□□ -1.15
MSH6-211ENST00000606499 POLD3Q15054 466 aaPredicted RBP7.87□□□□□ -1.15
MSH6-211ENST00000606499 PON2Q15165 354 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 PLEKHG6Q3KR16 790 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 PARP15Q460N3 678 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 AFMIDQ63HM1 303 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 TMEM215Q68D42 235 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 LEKR1Q6ZMV7 388 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 ARHGAP36Q6ZRI8 547 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 B4GALNT4Q76KP1 1039 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 KIAA0907Q7Z7F0 614 aaPredicted RBP7.87□□□□□ -1.15
MSH6-211ENST00000606499 ADIPOR2Q86V24 386 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 RALGPS2Q86X27 583 aaPredicted RBP7.87□□□□□ -1.15
MSH6-211ENST00000606499 ZNF354CQ86Y25 554 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 SLC13A5Q86YT5 568 aaPredicted RBP7.87□□□□□ -1.15
MSH6-211ENST00000606499 UBALD2Q8IYN6 164 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 SIX5Q8N196 739 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.87□□□□□ -1.15
MSH6-211ENST00000606499 SORCS1Q8WY21 1168 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 ATG4AQ8WYN0 398 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 EZH1Q92800 747 aaPredicted RBP7.87□□□□□ -1.15
MSH6-211ENST00000606499 ARHGEF2Q92974 986 aaKnown RBP7.87□□□□□ -1.15
MSH6-211ENST00000606499 ALG14Q96F25 216 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 CAPZA3Q96KX2 299 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 PNKPQ96T60 521 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 P2RY13Q9BPV8 354 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 FEM1AQ9BSK4 669 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 SPON2Q9BUD6 331 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 MAK16Q9BXY0 300 aaKnown RBP7.87□□□□□ -1.15
MSH6-211ENST00000606499 SLC39A8Q9C0K1 460 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 RETREG1Q9H6L5 497 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 C8orf33Q9H7E9 229 aaPredicted RBP7.87□□□□□ -1.15
MSH6-211ENST00000606499 ATP13A1Q9HD20 1204 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 ARHGEF3Q9NR81 526 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 KIAA1522Q9P206 1035 aaPredicted RBP7.87□□□□□ -1.15
MSH6-211ENST00000606499 VPS28Q9UK41 221 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 FBXL21Q9UKT6 434 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 NDRG2Q9UN36 371 aaKnown RBP7.87□□□□□ -1.15
MSH6-211ENST00000606499 EFR3BQ9Y2G0 817 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 SLC27A6Q9Y2P4 619 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 SAR1BQ9Y6B6 198 aa7.87□□□□□ -1.15
MSH6-211ENST00000606499 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.86□□□□□ -1.15
MSH6-211ENST00000606499 J3KR12 359 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 APOC4-APOC2K7ER74 178 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 KIF2AO00139 706 aaPredicted RBP7.86□□□□□ -1.15
MSH6-211ENST00000606499 CBX4O00257 560 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 PGRMC1O00264 195 aaKnown RBP7.86□□□□□ -1.15
MSH6-211ENST00000606499 CES2O00748 559 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 ZNF500O60304 480 aaPredicted RBP7.86□□□□□ -1.15
MSH6-211ENST00000606499 SNAP91O60641 907 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 TJP3O95049 919 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 EGFP01133 1207 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 APOC2P02655 101 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 APODP05090 189 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 GLULP15104 373 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 ZFXP17010 805 aaPredicted RBP7.86□□□□□ -1.15
MSH6-211ENST00000606499 TGM2P21980 687 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 STK19P49842 368 aaPredicted RBP7.86□□□□□ -1.15
MSH6-211ENST00000606499 SEC13P55735 322 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 OXCT1P55809 520 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 YBEYP58557 167 aaPredicted RBP7.86□□□□□ -1.15
MSH6-211ENST00000606499 ZXDAP98168 799 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 OTUD4Q01804 1114 aaKnown RBP7.86□□□□□ -1.15
MSH6-211ENST00000606499 GALNT2Q10471 571 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 SERINC3Q13530 473 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 SLC12A1Q13621 1099 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 NOMO1Q15155 1222 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 SIX1Q15475 284 aaPredicted RBP7.86□□□□□ -1.15
MSH6-211ENST00000606499 LONRF2Q1L5Z9 754 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 FAM182AQ5T1J6 154 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 CCDC181Q5TID7 509 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 MBLAC2Q68D91 279 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 IL31Q6EBC2 164 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 FSTL4Q6MZW2 842 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 LINGO4Q6UY18 593 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 ZNF783Q6ZMS7 281 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 AHI1Q8N157 1196 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 RASGEF1CQ8N431 466 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 ATPAF2Q8N5M1 289 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 LZTR1Q8N653 840 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 ZNF557Q8N988 423 aaPredicted RBP7.86□□□□□ -1.15
MSH6-211ENST00000606499 DCAF4L2Q8NA75 395 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 ACTL9Q8TC94 416 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 FAM3CQ92520 227 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 P3H4Q92791 437 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 MSANTD3Q96H12 275 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 PBKQ96KB5 322 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 OLFM3Q96PB7 478 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 LGMNQ99538 433 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 ACE2Q9BYF1 805 aaPredicted RBP7.86□□□□□ -1.15
MSH6-211ENST00000606499 CIPCQ9C0C6 399 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 MAGEH1Q9H213 219 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 ZDHHC4Q9NPG8 344 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 DONSONQ9NYP3 566 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 WNT16Q9UBV4 365 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms