RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 CEP41Q9BYV8 373 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 NKX2-4Q9H2Z4 354 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 HCFC1R1Q9NWW0 138 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 DNMT3BQ9UBC3 853 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 IPO11Q9UI26 975 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 ZFP37Q9Y6Q3 630 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 ANAPC1Q9H1A4 1944 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 SOBPA7XYQ1 873 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 PER2O15055 1255 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 ZBTB24O43167 697 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 RAMP2O60895 175 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 CKMP06732 381 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 POU2F2P09086 479 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 LMAN1P49257 510 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 ZNF844Q08AG5 666 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 ZBTB17Q13105 803 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 POLD3Q15054 466 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 ANO4Q32M45 955 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 CEP85LQ5SZL2 805 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 CFAP52Q8N1V2 620 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 OR2W6PQ8NHA6 318 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 HMCESQ96FZ2 354 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 C9orf72Q96LT7 481 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 IL12RB2Q99665 862 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 LSM7Q9UK45 103 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 ZNF510Q9Y2H8 683 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 MTCL1Q9Y4B5 1905 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 GOLGA8KD6RF30 607 aa18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 GREM1O60565 184 aa18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 CLDN11O75508 207 aa18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 ACSL3O95573 720 aa18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 PSMB4P28070 264 aa18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 TTC39BQ5VTQ0 682 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 Q6ZNB5 142 aa18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 CHST9Q7L1S5 443 aa18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 CROCCP2Q86T23 111 aa18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 CIR1Q86X95 450 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 ZBED8Q8IZ13 594 aa18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 MAML1Q92585 1016 aa18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 AGAP3Q96P47 875 aa18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 SLC46A2Q9BY10 475 aa18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 GBA3Q9H227 469 aa18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 CERS4Q9HA82 394 aa18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 RSPH14Q9UHP6 348 aa18.05■□□□□ 0.48
SHKBP1-224ENST00000600718 GOLGA6L10A6NI86 522 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 SHBGP04278 402 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 RHOP08100 348 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 ABHD2P08910 425 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 GJA1P17302 382 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 OAS2P29728 719 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 ZXDBP98169 803 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 BBS9Q3SYG4 887 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 MSS51Q4VC12 460 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 ARHGAP15Q53QZ3 475 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 SYCP2LQ5T4T6 812 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 PPP2R2DQ66LE6 453 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 HTR3DQ70Z44 454 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 SHKBP1Q8TBC3 707 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 PYROXD1Q8WU10 500 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 SERPINB12Q96P63 405 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 TMEM109Q9BVC6 243 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 PRKD2Q9BZL6 878 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 TLE6Q9H808 572 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 XAB2Q9HCS7 855 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 HCFC2Q9Y5Z7 792 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 TSHRP16473 764 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 CD68P34810 354 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 CCR2P41597 374 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 RPS24P62847 133 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 PRPSAP1Q14558 356 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 UBAP2Q5T6F2 1119 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 GPR158Q5T848 1215 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 RBM23Q86U06 439 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 CAND1Q86VP6 1230 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 ARNTL2Q8WYA1 636 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 PRICKLE1Q96MT3 831 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 MAGEH1Q9H213 219 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 SH3BP1Q9Y3L3 701 aa18.04■□□□□ 0.48
SHKBP1-224ENST00000600718 GBF1Q92538 1859 aa18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 ERI2A8K979 691 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 PSMD3O43242 534 aa18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 MYZAPP0CAP1 466 aa18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 MLNP12872 115 aa18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 RENBPP51606 427 aa18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 ZNF177Q13360 481 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 SERINC3Q13530 473 aa18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 HNRNPDQ14103 355 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 FASTKD3Q14CZ7 662 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 DNAJC21Q5F1R6 531 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 ADGRD2Q7Z7M1 963 aa18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 FAM217AQ8IXS0 508 aa18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 CNTD1Q8N815 330 aa18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 PDCD7Q8N8D1 485 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 UHMK1Q8TAS1 419 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 LRRC39Q96DD0 335 aa18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 ROPN1BQ9BZX4 212 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 TASP1Q9H6P5 420 aa18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 SLC28A3Q9HAS3 691 aa18.03■□□□□ 0.48
SHKBP1-224ENST00000600718 ROPN1Q9HAT0 212 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms