RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 BNIP3Q12983 259 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 TARDBPQ13148 414 aaKnown RBP eCLIP17.71■□□□□ 0.43
SMG9-210ENST00000600097 RTP5Q14D33 572 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 RABGAP1LQ5R372 815 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 DENND1BQ6P3S1 775 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 FBXL19Q6PCT2 694 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 CACTIN-AS1Q8N1I8 211 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 FRS2Q8WU20 508 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 KREMEN1Q96MU8 473 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 ARHGAP20Q9P2F6 1191 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 CYTH4Q9UIA0 394 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 AK5Q9Y6K8 562 aa17.71■□□□□ 0.43
SMG9-210ENST00000600097 BICDL2A1A5D9 508 aa17.7■□□□□ 0.42
SMG9-210ENST00000600097 E5RJQ4 531 aa17.7■□□□□ 0.42
SMG9-210ENST00000600097 RRP8O43159 456 aaKnown RBP17.7■□□□□ 0.42
SMG9-210ENST00000600097 PLRG1O43660 514 aaKnown RBP17.7■□□□□ 0.42
SMG9-210ENST00000600097 LETM1O95202 739 aaPredicted RBP17.7■□□□□ 0.42
SMG9-210ENST00000600097 GNA14O95837 355 aa17.7■□□□□ 0.42
SMG9-210ENST00000600097 VAV1P15498 845 aa17.7■□□□□ 0.42
SMG9-210ENST00000600097 CCR1P32246 355 aa17.7■□□□□ 0.42
SMG9-210ENST00000600097 CLDN6P56747 220 aa17.7■□□□□ 0.42
SMG9-210ENST00000600097 SEMG2Q02383 582 aa17.7■□□□□ 0.42
SMG9-210ENST00000600097 KCNH2Q12809 1159 aa17.7■□□□□ 0.42
SMG9-210ENST00000600097 MTA1Q13330 715 aa17.7■□□□□ 0.42
SMG9-210ENST00000600097 EIF4EBP2Q13542 120 aaPredicted RBP17.7■□□□□ 0.42
SMG9-210ENST00000600097 STAT4Q14765 748 aa17.7■□□□□ 0.42
SMG9-210ENST00000600097 TTI2Q6NXR4 508 aa17.7■□□□□ 0.42
SMG9-210ENST00000600097 TRIM69Q86WT6 500 aa17.7■□□□□ 0.42
SMG9-210ENST00000600097 SPATS2Q86XZ4 545 aaKnown RBP17.7■□□□□ 0.42
SMG9-210ENST00000600097 PIP4K2CQ8TBX8 421 aa17.7■□□□□ 0.42
SMG9-210ENST00000600097 ZNF606Q8WXB4 792 aa17.7■□□□□ 0.42
SMG9-210ENST00000600097 CRELD1Q96HD1 420 aa17.7■□□□□ 0.42
SMG9-210ENST00000600097 PRMT1Q99873 361 aaKnown RBP17.7■□□□□ 0.42
SMG9-210ENST00000600097 SLC25A13Q9UJS0 675 aa17.7■□□□□ 0.42
SMG9-210ENST00000600097 C1QTNF3-AMACRE9PGA6 284 aa17.69■□□□□ 0.42
SMG9-210ENST00000600097 ALOX15BO15296 676 aa17.69■□□□□ 0.42
SMG9-210ENST00000600097 ATP9BO43861 1147 aa17.69■□□□□ 0.42
SMG9-210ENST00000600097 RTN2O75298 545 aa17.69■□□□□ 0.42
SMG9-210ENST00000600097 GLI1P08151 1106 aa17.69■□□□□ 0.42
SMG9-210ENST00000600097 CD44P16070 742 aaKnown RBP17.69■□□□□ 0.42
SMG9-210ENST00000600097 CDK17Q00537 523 aa17.69■□□□□ 0.42
SMG9-210ENST00000600097 ACCSLQ4AC99 568 aa17.69■□□□□ 0.42
SMG9-210ENST00000600097 KLHL10Q6JEL2 608 aa17.69■□□□□ 0.42
SMG9-210ENST00000600097 CXorf57Q6NSI4 855 aaKnown RBP17.69■□□□□ 0.42
SMG9-210ENST00000600097 KANSL1Q7Z3B3 1105 aa17.69■□□□□ 0.42
SMG9-210ENST00000600097 TRIM59Q8IWR1 403 aa17.69■□□□□ 0.42
SMG9-210ENST00000600097 ELOA2Q8IYF1 753 aaPredicted RBP17.69■□□□□ 0.42
SMG9-210ENST00000600097 BAP1Q92560 729 aa17.69■□□□□ 0.42
SMG9-210ENST00000600097 INTS2Q9H0H0 1204 aaKnown RBP17.69■□□□□ 0.42
SMG9-210ENST00000600097 FAM204AQ9H8W3 233 aa17.69■□□□□ 0.42
SMG9-210ENST00000600097 PPM1HQ9ULR3 514 aa17.69■□□□□ 0.42
SMG9-210ENST00000600097 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.69■□□□□ 0.42
SMG9-210ENST00000600097 PRAMEF26H0Y7S4 382 aa17.68■□□□□ 0.42
SMG9-210ENST00000600097 TK2O00142 265 aa17.68■□□□□ 0.42
SMG9-210ENST00000600097 MCF2LO15068 1137 aa17.68■□□□□ 0.42
SMG9-210ENST00000600097 RNGTTO60942 597 aaKnown RBP17.68■□□□□ 0.42
SMG9-210ENST00000600097 AFPP02771 609 aaKnown RBP17.68■□□□□ 0.42
SMG9-210ENST00000600097 ITPKBP27987 946 aa17.68■□□□□ 0.42
SMG9-210ENST00000600097 MAT2AP31153 395 aaKnown RBP17.68■□□□□ 0.42
SMG9-210ENST00000600097 ANP32AP39687 249 aaKnown RBP17.68■□□□□ 0.42
SMG9-210ENST00000600097 METAP1P53582 386 aa17.68■□□□□ 0.42
SMG9-210ENST00000600097 MARSP56192 900 aaKnown RBP17.68■□□□□ 0.42
SMG9-210ENST00000600097 PITX1P78337 314 aaPredicted RBP17.68■□□□□ 0.42
SMG9-210ENST00000600097 PDCLQ13371 301 aa17.68■□□□□ 0.42
SMG9-210ENST00000600097 SETMARQ53H47 684 aaPredicted RBP17.68■□□□□ 0.42
SMG9-210ENST00000600097 ISM2Q6H9L7 571 aa17.68■□□□□ 0.42
SMG9-210ENST00000600097 FBXL22Q6P050 247 aa17.68■□□□□ 0.42
SMG9-210ENST00000600097 ENOSF1Q7L5Y1 443 aa17.68■□□□□ 0.42
SMG9-210ENST00000600097 CIR1Q86X95 450 aaPredicted RBP17.68■□□□□ 0.42
SMG9-210ENST00000600097 SNIP1Q8TAD8 396 aaKnown RBP17.68■□□□□ 0.42
SMG9-210ENST00000600097 NELFBQ8WX92 580 aa17.68■□□□□ 0.42
SMG9-210ENST00000600097 RFFLQ8WZ73 363 aa17.68■□□□□ 0.42
SMG9-210ENST00000600097 RNF34Q969K3 372 aa17.68■□□□□ 0.42
SMG9-210ENST00000600097 RPRD1AQ96P16 312 aaPredicted RBP17.68■□□□□ 0.42
SMG9-210ENST00000600097 FEM1AQ9BSK4 669 aa17.68■□□□□ 0.42
SMG9-210ENST00000600097 UBE2TQ9NPD8 197 aaPredicted RBP17.68■□□□□ 0.42
SMG9-210ENST00000600097 DDIT4Q9NX09 232 aa17.68■□□□□ 0.42
SMG9-210ENST00000600097 MAN1B1Q9UKM7 699 aa17.68■□□□□ 0.42
SMG9-210ENST00000600097 SARDHQ9UL12 918 aa17.68■□□□□ 0.42
SMG9-210ENST00000600097 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.67■□□□□ 0.42
SMG9-210ENST00000600097 THAP12O43422 761 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 TLX3O43711 291 aaPredicted RBP17.67■□□□□ 0.42
SMG9-210ENST00000600097 ZNF18P17022 549 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 ACP1P24666 158 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 GNA15P30679 374 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 NUMBP49757 651 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 CNTN1Q12860 1018 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 ZNF177Q13360 481 aaPredicted RBP17.67■□□□□ 0.42
SMG9-210ENST00000600097 DLG2Q15700 870 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 EFHC1Q5JVL4 640 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 AGBL4Q5VU57 503 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 ALG14Q96F25 216 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 FAM81BQ96LP2 452 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 SLC2A13Q96QE2 648 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 PRORYQ9H606 182 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 PREBQ9HCU5 417 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 ASNSD1Q9NWL6 643 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 VPS28Q9UK41 221 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 CLCA2Q9UQC9 943 aa17.67■□□□□ 0.42
SMG9-210ENST00000600097 TP53BP1Q12888 1972 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms