RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 PRAMEF26H0Y7S4 382 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 SLC31A1O15431 190 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 PIAS2O75928 621 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 ADH1BP00325 375 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 ASLP04424 464 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 GP1BAP07359 652 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 THEGLP0DJG4 465 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 PRLRP16471 622 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 STK19P49842 368 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 RPS24P62847 133 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 TLE1Q04724 770 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 TGIF1Q15583 401 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 CDKN3Q16667 212 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 PITRM1Q5JRX3 1037 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 MPP7Q5T2T1 576 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 BSPRYQ5W0U4 402 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 USP53Q70EK8 1073 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 APCDD1Q8J025 514 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 CFAP52Q8N1V2 620 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 GUF1Q8N442 669 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 PRICKLE1Q96MT3 831 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 SARDHQ9UL12 918 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 MAPK8IP1Q9UQF2 711 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 DMTF1Q9Y222 760 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 NBASA2RRP1 2371 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 YJEFN3A6XGL0 299 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 E7ENQ6 273 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 K7ESM1 405 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 CALUO43852 315 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 ECT2LQ008S8 904 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 NFIL3Q16649 462 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 NADSYN1Q6IA69 706 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 GUSBP11Q6P575 273 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 OR13H1Q8NG92 308 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 NOX5Q96PH1 765 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 CALN1Q9BXU9 219 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 UBXN6Q9BZV1 441 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 CYP3A43Q9HB55 503 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 FZD3Q9NPG1 666 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 OLA1Q9NTK5 396 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 TPX2Q9ULW0 747 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 CEP83Q9Y592 693 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 PCDHGA8Q9Y5G5 932 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 KIF26BQ2KJY2 2108 aa14.2□□□□□ -0.14
SHKBP1-208ENST00000595726 CENPEQ02224 2701 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 PLRG1O43660 514 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 ACSL4O60488 711 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 LATS1O95835 1130 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 SRPRAP08240 638 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 ALPPL2P10696 532 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 NR2F2P24468 414 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 CLDN2P57739 230 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 CNTN1Q12860 1018 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 DRAP1Q14919 205 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 ZCWPW2Q504Y3 356 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 C4orf17Q53FE4 359 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 CEP135Q66GS9 1140 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 SMYD4Q8IYR2 804 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 ARL14Q8N4G2 192 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 KDM1BQ8NB78 822 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 SPATA20Q8TB22 786 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 TAS1R2Q8TE23 839 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 TATDN2Q93075 761 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 TIGD1Q96MW7 591 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 RMND1Q9NWS8 449 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 NLGN3Q9NZ94 848 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 TJP2Q9UDY2 1190 aa14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 ATXN7L1Q9ULK2 861 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-208ENST00000595726 ITIH6Q6UXX5 1313 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 SCAMP1O15126 338 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 LZTS3O60299 673 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 NOBOXO60393 691 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 GJB6O95452 261 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 CR2P20023 1033 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 SLC11A2P49281 568 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 DUSP3P51452 185 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 TAS2R38P59533 333 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 ZNF177Q13360 481 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 SETMARQ53H47 684 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 AGBL4Q5VU57 503 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 HIST2H2BCQ6DN03 193 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 EFL1Q7Z2Z2 1120 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 CLEC14AQ86T13 490 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 TRIM69Q86WT6 500 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 SLC22A18ASQ8N1D0 253 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 ANKRD52Q8NB46 1076 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 SLC4A11Q8NBS3 891 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 TMEM145Q8NBT3 493 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 ERCC4Q92889 916 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 FAM131CQ96AQ9 280 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 SGF29Q96ES7 293 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 GSDMAQ96QA5 445 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 NIF3L1Q9GZT8 377 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 KDM4CQ9H3R0 1056 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 DNAJC28Q9NX36 388 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 FRMD4BQ9Y2L6 1034 aa14.18□□□□□ -0.14
SHKBP1-208ENST00000595726 ITPR2Q14571 2701 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 COL27A1Q8IZC6 1860 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms