RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 VAV1P15498 845 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 CDK11BP21127 795 aaKnown RBP24.13■■□□□ 1.45
LSM4-204ENST00000594828 C5AR1P21730 350 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 STAT1P42224 750 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 SYCP1Q15431 976 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 HLA-BQ31612 363 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 ALFQ53S48 1182 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 ACBD5Q5T8D3 534 aaPredicted RBP24.13■■□□□ 1.45
LSM4-204ENST00000594828 ARCQ7LC44 396 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 FRS2Q8WU20 508 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 CFAP57Q96MR6 1250 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 MUC3BQ9H195 1237 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 IL21RQ9HBE5 538 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 SNX10Q9Y5X0 201 aa24.13■■□□□ 1.45
LSM4-204ENST00000594828 LRRC72A6NJI9 287 aa24.12■■□□□ 1.45
LSM4-204ENST00000594828 DRGXA6NNA5 263 aa24.12■■□□□ 1.45
LSM4-204ENST00000594828 IGHV4-34P06331 123 aa24.12■■□□□ 1.45
LSM4-204ENST00000594828 GOT1P17174 413 aa24.12■■□□□ 1.45
LSM4-204ENST00000594828 CHRNB2P17787 502 aa24.12■■□□□ 1.45
LSM4-204ENST00000594828 FMO1Q01740 532 aa24.12■■□□□ 1.45
LSM4-204ENST00000594828 CCDC183Q5T5S1 534 aa24.12■■□□□ 1.45
LSM4-204ENST00000594828 TRNP1Q6NT89 227 aa24.12■■□□□ 1.45
LSM4-204ENST00000594828 NCEH1Q6PIU2 408 aa24.12■■□□□ 1.45
LSM4-204ENST00000594828 ZNF683Q8IZ20 524 aa24.12■■□□□ 1.45
LSM4-204ENST00000594828 AADATQ8N5Z0 425 aa24.12■■□□□ 1.45
LSM4-204ENST00000594828 NEK11Q8NG66 645 aa24.12■■□□□ 1.45
LSM4-204ENST00000594828 CAMK1GQ96NX5 476 aa24.12■■□□□ 1.45
LSM4-204ENST00000594828 TMPRSS4Q9NRS4 437 aa24.12■■□□□ 1.45
LSM4-204ENST00000594828 WASF3Q9UPY6 502 aa24.12■■□□□ 1.45
LSM4-204ENST00000594828 PCDHB9Q9Y5E1 797 aa24.12■■□□□ 1.45
LSM4-204ENST00000594828 LRRC10BA6NIK2 292 aa24.11■■□□□ 1.45
LSM4-204ENST00000594828 ATP9BO43861 1147 aa24.11■■□□□ 1.45
LSM4-204ENST00000594828 TOP3BO95985 862 aaKnown RBP24.11■■□□□ 1.45
LSM4-204ENST00000594828 RHOCP08134 193 aa24.11■■□□□ 1.45
LSM4-204ENST00000594828 ZNF883P0CG24 379 aa24.11■■□□□ 1.45
LSM4-204ENST00000594828 MMP8P22894 467 aa24.11■■□□□ 1.45
LSM4-204ENST00000594828 RDXP35241 583 aaKnown RBP24.11■■□□□ 1.45
LSM4-204ENST00000594828 GRIA4P48058 902 aa24.11■■□□□ 1.45
LSM4-204ENST00000594828 FAM193AP78312 1265 aa24.11■■□□□ 1.45
LSM4-204ENST00000594828 UBXN1Q04323 297 aa24.11■■□□□ 1.45
LSM4-204ENST00000594828 DLG2Q15700 870 aa24.11■■□□□ 1.45
LSM4-204ENST00000594828 KIF19Q2TAC6 998 aa24.11■■□□□ 1.45
LSM4-204ENST00000594828 BNIPLQ7Z465 357 aa24.11■■□□□ 1.45
LSM4-204ENST00000594828 NAXDQ8IW45 347 aa24.11■■□□□ 1.45
LSM4-204ENST00000594828 OR2T34Q8NGX1 318 aa24.11■■□□□ 1.45
LSM4-204ENST00000594828 HAPLN3Q96S86 360 aa24.11■■□□□ 1.45
LSM4-204ENST00000594828 ORAI3Q9BRQ5 295 aa24.11■■□□□ 1.45
LSM4-204ENST00000594828 METTL5Q9NRN9 209 aaKnown RBP24.11■■□□□ 1.45
LSM4-204ENST00000594828 TM7SF3Q9NS93 570 aa24.11■■□□□ 1.45
LSM4-204ENST00000594828 PCNX2A6NKB5 2137 aa24.1■■□□□ 1.45
LSM4-204ENST00000594828 CACNA1EQ15878 2313 aa24.1■■□□□ 1.45
LSM4-204ENST00000594828 LGALS16A8MUM7 142 aa24.1■■□□□ 1.45
LSM4-204ENST00000594828 SRGAP2O75044 1071 aa24.1■■□□□ 1.45
LSM4-204ENST00000594828 SPINK2P20155 84 aa24.1■■□□□ 1.45
LSM4-204ENST00000594828 KRT83P78385 493 aa24.1■■□□□ 1.45
LSM4-204ENST00000594828 TRIP6Q15654 476 aaKnown RBP24.1■■□□□ 1.45
LSM4-204ENST00000594828 TRIM72Q6ZMU5 477 aa24.1■■□□□ 1.45
LSM4-204ENST00000594828 DSG4Q86SJ6 1040 aa24.1■■□□□ 1.45
LSM4-204ENST00000594828 SETD3Q86TU7 594 aaPredicted RBP24.1■■□□□ 1.45
LSM4-204ENST00000594828 EMC1Q8N766 993 aa24.1■■□□□ 1.45
LSM4-204ENST00000594828 OR14C36Q8NHC7 312 aa24.1■■□□□ 1.45
LSM4-204ENST00000594828 SLC30A5Q8TAD4 765 aa24.1■■□□□ 1.45
LSM4-204ENST00000594828 OR8D1Q8WZ84 308 aa24.1■■□□□ 1.45
LSM4-204ENST00000594828 MPP6Q9NZW5 540 aa24.1■■□□□ 1.45
LSM4-204ENST00000594828 ANKRD6Q9Y2G4 727 aa24.1■■□□□ 1.45
LSM4-204ENST00000594828 FNDC3AQ9Y2H6 1198 aaKnown RBP24.1■■□□□ 1.45
LSM4-204ENST00000594828 SNX11Q9Y5W9 270 aa24.1■■□□□ 1.45
LSM4-204ENST00000594828 A0A1W2PPC4 97 aa24.09■■□□□ 1.45
LSM4-204ENST00000594828 E9PAM4 449 aa24.09■■□□□ 1.45
LSM4-204ENST00000594828 ENDOD1O94919 500 aa24.09■■□□□ 1.45
LSM4-204ENST00000594828 RACK1P63244 317 aaKnown RBP24.09■■□□□ 1.45
LSM4-204ENST00000594828 ATP11AP98196 1134 aa24.09■■□□□ 1.45
LSM4-204ENST00000594828 NCAPHQ15003 741 aa24.09■■□□□ 1.45
LSM4-204ENST00000594828 ST3GAL2Q16842 350 aa24.09■■□□□ 1.45
LSM4-204ENST00000594828 FAM46CQ5VWP2 391 aa24.09■■□□□ 1.45
LSM4-204ENST00000594828 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.09■■□□□ 1.45
LSM4-204ENST00000594828 ADAT2Q7Z6V5 191 aaKnown RBP24.09■■□□□ 1.45
LSM4-204ENST00000594828 PHLDB2Q86SQ0 1253 aa24.09■■□□□ 1.45
LSM4-204ENST00000594828 FAM131BQ86XD5 332 aa24.09■■□□□ 1.45
LSM4-204ENST00000594828 SH2D3CQ8N5H7 860 aa24.09■■□□□ 1.45
LSM4-204ENST00000594828 SETD7Q8WTS6 366 aaKnown RBP24.09■■□□□ 1.45
LSM4-204ENST00000594828 C11orf70Q9BRQ4 267 aa24.09■■□□□ 1.45
LSM4-204ENST00000594828 C2orf49Q9BVC5 232 aaPredicted RBP24.09■■□□□ 1.45
LSM4-204ENST00000594828 SCNM1Q9BWG6 230 aa24.09■■□□□ 1.45
LSM4-204ENST00000594828 IGLV3-10A0A075B6K4 115 aa24.08■■□□□ 1.45
LSM4-204ENST00000594828 UNGP13051 313 aaPredicted RBP24.08■■□□□ 1.45
LSM4-204ENST00000594828 OR1E1P30953 314 aa24.08■■□□□ 1.45
LSM4-204ENST00000594828 ADPRHP54922 357 aa24.08■■□□□ 1.45
LSM4-204ENST00000594828 C6orf118Q5T5N4 469 aa24.08■■□□□ 1.45
LSM4-204ENST00000594828 TFAP2DQ7Z6R9 452 aa24.08■■□□□ 1.45
LSM4-204ENST00000594828 RXFP2Q8WXD0 754 aa24.08■■□□□ 1.45
LSM4-204ENST00000594828 ERGIC2Q96RQ1 377 aa24.08■■□□□ 1.45
LSM4-204ENST00000594828 PCDHB18PQ96TA0 734 aa24.08■■□□□ 1.45
LSM4-204ENST00000594828 PSMB7Q99436 277 aa24.08■■□□□ 1.45
LSM4-204ENST00000594828 SARDHQ9UL12 918 aa24.08■■□□□ 1.45
LSM4-204ENST00000594828 PPM1HQ9ULR3 514 aa24.08■■□□□ 1.45
LSM4-204ENST00000594828 HS3ST2Q9Y278 367 aa24.08■■□□□ 1.45
LSM4-204ENST00000594828 PCDHGB2Q9Y5G2 931 aa24.08■■□□□ 1.45
LSM4-204ENST00000594828 TBC1D3DA0A087WVF3 549 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 TBC1D3IA0A087WXS9 549 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms