RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 NXF1Q9UBU9 619 aaKnown RBP15.49■□□□□ 0.07
CIRBP-228ENST00000590347 ERVK-11Q9UQG0 969 aa15.49■□□□□ 0.07
CIRBP-228ENST00000590347 DRG1Q9Y295 367 aaKnown RBP15.49■□□□□ 0.07
CIRBP-228ENST00000590347 NUB1Q9Y5A7 615 aa15.49■□□□□ 0.07
CIRBP-228ENST00000590347 PCM1Q15154 2024 aa15.49■□□□□ 0.07
CIRBP-228ENST00000590347 ARP10275 920 aa15.49■□□□□ 0.07
CIRBP-228ENST00000590347 TXNL4AP83876 142 aaKnown RBP15.49■□□□□ 0.07
CIRBP-228ENST00000590347 ZBTB17Q13105 803 aa15.49■□□□□ 0.07
CIRBP-228ENST00000590347 STILQ15468 1287 aa15.49■□□□□ 0.07
CIRBP-228ENST00000590347 FAM47CQ5HY64 1035 aa15.49■□□□□ 0.07
CIRBP-228ENST00000590347 RWDD4Q6NW29 188 aaKnown RBP15.49■□□□□ 0.07
CIRBP-228ENST00000590347 EXOC8Q8IYI6 725 aa15.49■□□□□ 0.07
CIRBP-228ENST00000590347 IL1RL2Q9HB29 575 aa15.49■□□□□ 0.07
CIRBP-228ENST00000590347 TBC1D14Q9P2M4 693 aa15.49■□□□□ 0.07
CIRBP-228ENST00000590347 AGO2Q9UKV8 859 aaKnown RBP15.49■□□□□ 0.07
CIRBP-228ENST00000590347 SLC8A2Q9UPR5 921 aa15.49■□□□□ 0.07
CIRBP-228ENST00000590347 NOL3O60936 208 aaKnown RBP15.48■□□□□ 0.07
CIRBP-228ENST00000590347 IL1BP01584 269 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 TNNI1P19237 187 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 HSPA13P48723 471 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 ORC1Q13415 861 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 E2F2Q14209 437 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 BRDTQ58F21 947 aaPredicted RBP15.48■□□□□ 0.07
CIRBP-228ENST00000590347 PCGF5Q86SE9 256 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 ZNF597Q96LX8 424 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 MRPL47Q9HD33 250 aaKnown RBP15.48■□□□□ 0.07
CIRBP-228ENST00000590347 ADAMTSL1Q8N6G6 1762 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 RNF103-CHMP3A0A140T963 221 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 hCG_1984214I3L0E3 225 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 XYLBO75191 536 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 ITGBL1O95965 494 aaPredicted RBP15.48■□□□□ 0.07
CIRBP-228ENST00000590347 C1QAP02745 245 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 CHRNB1P11230 501 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 ECE1P42892 770 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 ABCE1P61221 599 aaKnown RBP15.48■□□□□ 0.07
CIRBP-228ENST00000590347 DLG2Q15700 870 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 FAM102BQ5T8I3 360 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 SLFN13Q68D06 897 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 PLA2G4FQ68DD2 849 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 ACCSQ96QU6 501 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 DGCR6LQ9BY27 220 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 FANCEQ9HB96 536 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 GNPTGQ9UJJ9 305 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 PADI4Q9UM07 663 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 TRAF6Q9Y4K3 522 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 SQORQ9Y6N5 450 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 DDX60LQ5H9U9 1706 aaKnown RBP15.48■□□□□ 0.07
CIRBP-228ENST00000590347 KCNU1A8MYU2 1149 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 TMEM114B3SHH9 223 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 KCNN4O15554 427 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 CCNA2P20248 432 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 PTPN20Q4JDL3 420 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 HHIPL2Q6UWX4 724 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 TMC5Q6UXY8 1006 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 PRR23CQ6ZRP0 262 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 JOSD2Q8TAC2 188 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 ZC3H15Q8WU90 426 aaKnown RBP15.48■□□□□ 0.07
CIRBP-228ENST00000590347 PTCD2Q8WV60 388 aaKnown RBP15.48■□□□□ 0.07
CIRBP-228ENST00000590347 LPGAT1Q92604 370 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 ITPKCQ96DU7 683 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 DHX35Q9H5Z1 703 aaKnown RBP15.48■□□□□ 0.07
CIRBP-228ENST00000590347 KLHL3Q9UH77 587 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 PCDHB2Q9Y5E7 798 aa15.48■□□□□ 0.07
CIRBP-228ENST00000590347 TMEM233B4DJY2 109 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 SPAG6O75602 509 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 BMP10O95393 424 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 ALDOAP04075 364 aaKnown RBP15.47■□□□□ 0.07
CIRBP-228ENST00000590347 SERPINE1P05121 402 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 PSMA2P25787 234 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 LSM12Q3MHD2 195 aaKnown RBP15.47■□□□□ 0.07
CIRBP-228ENST00000590347 ZIK1Q3SY52 487 aaPredicted RBP15.47■□□□□ 0.07
CIRBP-228ENST00000590347 LGSNQ5TDP6 509 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 TTC30AQ86WT1 665 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 CGREF1Q99674 301 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 CTRCQ99895 268 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 POPDC2Q9HBU9 364 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 RABL2AQ9UBK7 228 aaPredicted RBP15.47■□□□□ 0.07
CIRBP-228ENST00000590347 IP6K2Q9UHH9 426 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 CARD8Q9Y2G2 431 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 E7ENX8 843 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 KPNA4O00629 521 aaPredicted RBP15.47■□□□□ 0.07
CIRBP-228ENST00000590347 AXIN1O15169 862 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 PLIN3O60664 434 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 CRHR1P34998 444 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 RACK1P63244 317 aaKnown RBP15.47■□□□□ 0.07
CIRBP-228ENST00000590347 PTP4A2Q12974 167 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 CCDC58Q4VC31 144 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 FSCBQ5H9T9 825 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 STRIP1Q5VSL9 837 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 KIAA0319LQ8IZA0 1049 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 SLC38A6Q8IZM9 456 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 PLD6Q8N2A8 252 aaKnown RBP15.47■□□□□ 0.07
CIRBP-228ENST00000590347 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.47■□□□□ 0.07
CIRBP-228ENST00000590347 KCTD6Q8NC69 237 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 SLCO4A1Q96BD0 722 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 CSF3RQ99062 836 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 HACD3Q9P035 362 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 SORCS3Q9UPU3 1222 aa15.47■□□□□ 0.07
CIRBP-228ENST00000590347 NFASCO94856 1347 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 C9JVG2 144 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms