RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 ELAVL3Q14576 367 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 ZSCAN23Q3MJ62 389 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 NUGGCQ68CJ6 796 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 CCDC81Q6ZN84 652 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 UNC45BQ8IWX7 931 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 SIX6OS1Q8N1H7 587 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 IFI44Q8TCB0 444 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 MAPK15Q8TD08 544 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 ARRDC3Q96B67 414 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 ZSWIM1Q9BR11 485 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 CALN1Q9BXU9 219 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 TMEM8AQ9HCN3 771 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 KLHL11Q9NVR0 708 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 SERTAD1Q9UHV2 236 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 DMTF1Q9Y222 760 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 FRMD4BQ9Y2L6 1034 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 ENTPD2Q9Y5L3 495 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 CDRT15L2A8MXV6 281 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 K7ESM1 405 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 MAGEC1O60732 1142 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 RNGTTO60942 597 aaKnown RBP13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 HSP90AA1P07900 732 aaKnown RBP13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 PDGFRAP16234 1089 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 NR2F2P24468 414 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 SLC8A3P57103 927 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 C1QBPQ07021 282 aaKnown RBP13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 CDKN3Q16667 212 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 FOXD4L6Q3SYB3 417 aaPredicted RBP13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 SETMARQ53H47 684 aaPredicted RBP13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 RNF219Q5W0B1 726 aaPredicted RBP13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 RAP1GAP2Q684P5 730 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 PMF1Q6P1K2 205 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 GUSBP11Q6P575 273 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 FOXD4L3Q6VB84 417 aaPredicted RBP13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 FAM186BQ8IYM0 893 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 LGI2Q8N0V4 545 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 DQX1Q8TE96 717 aaKnown RBP13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 KCTD13Q8WZ19 329 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 TFAP2BQ92481 460 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 PAGE5Q96GU1 130 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 FAM117AQ9C073 453 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 ABCG4Q9H172 646 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 MAGEF1Q9HAY2 307 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 CNGB3Q9NQW8 809 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 EXOC1Q9NV70 894 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 WDR70Q9NW82 654 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 MAPK8IP1Q9UQF2 711 aa13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 HEMK1Q9Y5R4 338 aaPredicted RBP13.17□□□□□ -0.3
PRKCSH-210ENST00000589990 NBPF19A0A087WUL8 3843 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 A0A1W2PQU0 124 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 CPED1A4D0V7 1026 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 O00370 1275 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 ACTN4O43707 911 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 LZTS3O60299 673 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 GP1BAP07359 652 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 CD19P15391 556 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 ITGB6P18564 788 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 RBMS1P29558 406 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 PDX1P52945 283 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 ZNF284Q2VY69 593 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 ARL13BQ3SXY8 428 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 SGO2Q562F6 1265 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 PERM1Q5SV97 790 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 PIP5KL1Q5T9C9 394 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 FOXD4L5Q5VV16 416 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 OR6B2Q6IFH4 312 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 IGF2-ASQ6U949 168 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 GCNT7Q6ZNI0 430 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 Q6ZVU0 165 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 INTS8Q75QN2 995 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 OR52K2Q8NGK3 314 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 FOXD4L4Q8WXT5 416 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 EXTL1Q92935 676 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 AZIN2Q96A70 460 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 SLC39A13Q96H72 371 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 SPAG5Q96R06 1193 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 RAB20Q9NX57 234 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 NLGN3Q9NZ94 848 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 KLF15Q9UIH9 416 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 PPM1HQ9ULR3 514 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 TPX2Q9ULW0 747 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 NAALADL1Q9UQQ1 740 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 TRAF3IP3Q9Y228 551 aa13.16□□□□□ -0.3
PRKCSH-210ENST00000589990 USP9YO00507 2555 aaPredicted RBP13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 SCAMP1O15126 338 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 MAPK13O15264 365 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 SLC7A4O43246 635 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 TNFSF15O95150 251 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 LTFP02788 710 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 CTSLP07711 333 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 FAM87AP0C7U9 286 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 IRAK1P51617 712 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 TGIF1Q15583 401 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 HS1BP3Q53T59 392 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 TPRG1LQ5T0D9 272 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 RESP18Q5W5W9 173 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 SEL1L3Q68CR1 1132 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 KRT39Q6A163 491 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 EFL1Q7Z2Z2 1120 aaKnown RBP13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 TAC4Q86UU9 113 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms