RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	MOCS3	O95396	460 aa		17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	MT-CO1	P00395	513 aa		17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	GLDC	P23378	1020 aa		17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	MPL	P40238	635 aa		17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	SF3A2	Q15428	464 aa	Known RBP	17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	DCUN1D2	Q6PH85	259 aa		17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	SARM1	Q6SZW1	724 aa		17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	LRRC31	Q6UY01	552 aa		17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	TMC6	Q7Z403	805 aa		17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	SETD3	Q86TU7	594 aa	Predicted RBP	17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	ZNF653	Q96CK0	615 aa		17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	SPACA7	Q96KW9	195 aa		17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	ZYG11B	Q9C0D3	744 aa		17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	RBSN	Q9H1K0	784 aa		17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	RSPH9	Q9H1X1	276 aa	Predicted RBP	17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	TMEM74B	Q9NUR3	256 aa		17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	SUN2	Q9UH99	717 aa		17.77	■□□□□ 0.44
MBD1-221	ENST00000589867	CNOT1	A5YKK6	2376 aa	Known RBP	17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	SPTBN2	O15020	2390 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	CBFA2T2	O43439	604 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	ATP9B	O43861	1147 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	RHOC	P08134	193 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	ZNF806	P0C7X5	589 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	OXCT1	P55809	520 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	SULT2A1	Q06520	285 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	TBX2	Q13207	712 aa	Predicted RBP	17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	BYSL	Q13895	437 aa	Known RBP	17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	TCEAL6	Q6IPX3	200 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	PRR23C	Q6ZRP0	262 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	ARMCX6	Q7L4S7	300 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	LPCAT2	Q7L5N7	544 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	SLFN11	Q7Z7L1	901 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	FNIP1	Q8TF40	1166 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	PRCC	Q92733	491 aa	Predicted RBP	17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	TCEAL3	Q969E4	200 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	ARHGEF26	Q96DR7	871 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	TOE1	Q96GM8	510 aa	Known RBP	17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	THAP2	Q9H0W7	228 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	NOL6	Q9H6R4	1146 aa	Known RBP	17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	VPS51	Q9UID3	782 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	USP18	Q9UMW8	372 aa		17.76	■□□□□ 0.43
MBD1-221	ENST00000589867	ILVBL	A1L0T0	632 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	TARSL2	A2RTX5	802 aa	Known RBP	17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	PATE3	B3GLJ2	98 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	C10orf142	B7Z368	130 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867		K7ERQ8	282 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	GDF9	O60383	454 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	CD160	O95971	181 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	RHOQ	P17081	205 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	ITPKA	P23677	461 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	PSMA2	P25787	234 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	CD6	P30203	668 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	OR1E1	P30953	314 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	L1CAM	P32004	1257 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	EIF4A3	P38919	411 aa	Known RBP	17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	DHPS	P49366	369 aa	Predicted RBP	17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	ST8SIA6	P61647	398 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	RPL6	Q02878	288 aa	Known RBP	17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	CREB5	Q02930	508 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	CA9	Q16790	459 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	ARL13B	Q3SXY8	428 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	SPDYC	Q5MJ68	293 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	DAB2IP	Q5VWQ8	1189 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	PEAR1	Q5VY43	1037 aa	Predicted RBP	17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	SCYL2	Q6P3W7	929 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	DRC7	Q8IY82	874 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	STK40	Q8N2I9	435 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	RMDN1	Q96DB5	314 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	ZNF419	Q96HQ0	510 aa	Predicted RBP	17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	CHP1	Q99653	195 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	FBRS	Q9HAH7	460 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	TMEM248	Q9NWD8	314 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	GPATCH2L	Q9NWQ4	482 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	MYO1A	Q9UBC5	1043 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	SERGEF	Q9UGK8	458 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	VPS28	Q9UK41	221 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	HS3ST2	Q9Y278	367 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	ACTL7A	Q9Y615	435 aa		17.75	■□□□□ 0.43
MBD1-221	ENST00000589867	EDDM13	A0A1B0GTR0	161 aa		17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	RNF103	O00237	685 aa		17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	ZBTB24	O43167	697 aa	Predicted RBP	17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	MAP3K13	O43283	966 aa		17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	SMAD6	O43541	496 aa	Known RBP	17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	ZNF821	O75541	412 aa	Predicted RBP	17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	CYP1A2	P05177	515 aa		17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	TPM3	P06753	285 aa		17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	MYBL1	P10243	752 aa		17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	SRC	P12931	536 aa		17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	TCF4	P15884	667 aa		17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	ACVRL1	P37023	503 aa		17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	METAP1	P53582	386 aa		17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	ALKBH5	Q6P6C2	394 aa	Known RBP	17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	SLC36A4	Q6YBV0	504 aa		17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	SH2D3C	Q8N5H7	860 aa		17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	GPR161	Q8N6U8	529 aa	Known RBP	17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	DCAF4L2	Q8NA75	395 aa		17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	OR8K1	Q8NGG5	319 aa		17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	TBC1D31	Q96DN5	1066 aa		17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	ACE2	Q9BYF1	805 aa	Predicted RBP	17.74	■□□□□ 0.43

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