RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 EYA2O00167 538 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 TLR2O60603 784 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 HEXIM1O94992 359 aaKnown RBP3.84□□□□□ -1.79
SMAD4-207ENST00000589076 TNNT1P13805 278 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 ATF7P17544 494 aaPredicted RBP3.84□□□□□ -1.79
SMAD4-207ENST00000589076 HOXD12P35452 270 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 KCNJ4P48050 445 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 TAS2R50P59544 299 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 WDR5P61964 334 aaKnown RBP3.84□□□□□ -1.79
SMAD4-207ENST00000589076 SRSF1Q07955 248 aaKnown RBP eCLIP3.84□□□□□ -1.79
SMAD4-207ENST00000589076 LARS2Q15031 903 aaKnown RBP3.84□□□□□ -1.79
SMAD4-207ENST00000589076 DLGAP5Q15398 846 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 GLE1Q53GS7 698 aaKnown RBP3.84□□□□□ -1.79
SMAD4-207ENST00000589076 SLC39A5Q6ZMH5 540 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 DCDC5Q6ZRR9 648 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 TMTC1Q8IUR5 882 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 ADPRHL1Q8NDY3 354 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 ZNF398Q8TD17 642 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 ARRDC3Q96B67 414 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 ZNF845Q96IR2 970 aaPredicted RBP3.84□□□□□ -1.79
SMAD4-207ENST00000589076 HIC2Q96JB3 615 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 SENP7Q9BQF6 1050 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 EIF2AK1Q9BQI3 630 aaKnown RBP3.84□□□□□ -1.79
SMAD4-207ENST00000589076 REEP2Q9BRK0 252 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 HTATIP2Q9BUP3 242 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 SFXN1Q9H9B4 322 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 PRDM16Q9HAZ2 1276 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 TMEM160Q9NX00 188 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 HEY2Q9UBP5 337 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 DNAJC16Q9Y2G8 782 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 TMEM98Q9Y2Y6 226 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 HEMK1Q9Y5R4 338 aaPredicted RBP3.84□□□□□ -1.79
SMAD4-207ENST00000589076 COPG1Q9Y678 874 aaKnown RBP3.84□□□□□ -1.79
SMAD4-207ENST00000589076 SIRT4Q9Y6E7 314 aaPredicted RBP3.84□□□□□ -1.79
SMAD4-207ENST00000589076 SPATA31A5Q5VU36 1347 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 SPATA31A7Q8IWB4 1347 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.83□□□□□ -1.8
SMAD4-207ENST00000589076 STX16-NPEPL1H3BU86 382 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 STX16O14662 325 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 ENO1P06733 434 aaKnown RBP3.83□□□□□ -1.8
SMAD4-207ENST00000589076 CYP19A1P11511 503 aaPredicted RBP3.83□□□□□ -1.8
SMAD4-207ENST00000589076 PNPLA4P41247 253 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 STAT6P42226 847 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 CCR5P51681 352 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.83□□□□□ -1.8
SMAD4-207ENST00000589076 GAB1Q13480 694 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 KCNB1Q14721 858 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 PFKFB3Q16875 520 aaPredicted RBP3.83□□□□□ -1.8
SMAD4-207ENST00000589076 ZNF484Q5JVG2 852 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 CBWD5Q5RIA9 395 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 DENND1BQ6P3S1 775 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 ZNF549Q6P9A3 640 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 C18orf65Q6ZTR6 163 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.83□□□□□ -1.8
SMAD4-207ENST00000589076 ESX1Q8N693 406 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 ANKRD44Q8N8A2 993 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.83□□□□□ -1.8
SMAD4-207ENST00000589076 CLEC4CQ8WTT0 213 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 MAP4K1Q92918 833 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 HVCN1Q96D96 273 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 P2RY11Q96G91 374 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 MPP4Q96JB8 637 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 ZFYVE19Q96K21 471 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 PPP1R10Q96QC0 940 aaKnown RBP3.83□□□□□ -1.8
SMAD4-207ENST00000589076 SEC62Q99442 399 aaKnown RBP3.83□□□□□ -1.8
SMAD4-207ENST00000589076 RMI1Q9H9A7 625 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 TMEM184CQ9NVA4 438 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 IFT80Q9P2H3 777 aaPredicted RBP3.83□□□□□ -1.8
SMAD4-207ENST00000589076 RCE1Q9Y256 329 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 B3GNT3Q9Y2A9 372 aa3.83□□□□□ -1.8
SMAD4-207ENST00000589076 VWA3AA6NCI4 1184 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 PRYO14603 147 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 EPB41L2O43491 1005 aaKnown RBP3.82□□□□□ -1.8
SMAD4-207ENST00000589076 KAT7O95251 611 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 PEPDP12955 493 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 CPA1P15085 419 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 NDUFS1P28331 727 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 VPS41P49754 854 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 ZNF84P51523 738 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 SLC37A1P57057 533 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 DDX10Q13206 875 aaKnown RBP3.82□□□□□ -1.8
SMAD4-207ENST00000589076 G3BP1Q13283 466 aaKnown RBP eCLIP3.82□□□□□ -1.8
SMAD4-207ENST00000589076 THOC5Q13769 683 aaKnown RBP3.82□□□□□ -1.8
SMAD4-207ENST00000589076 RALBP1Q15311 655 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 SLC9C1Q4G0N8 1177 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 LRRC24Q50LG9 513 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 WDR45BQ5MNZ6 344 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 CC2D1BQ5T0F9 858 aaKnown RBP3.82□□□□□ -1.8
SMAD4-207ENST00000589076 UBAP2Q5T6F2 1119 aaKnown RBP3.82□□□□□ -1.8
SMAD4-207ENST00000589076 ATG16L1Q676U5 607 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 RETSATQ6NUM9 610 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 RANBP10Q6VN20 620 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 SYNE3Q6ZMZ3 975 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.82□□□□□ -1.8
SMAD4-207ENST00000589076 TSPYL6Q8N831 410 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 ENDOVQ8N8Q3 282 aaKnown RBP3.82□□□□□ -1.8
SMAD4-207ENST00000589076 HTRA1Q92743 480 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 RBM17Q96I25 401 aaKnown RBP3.82□□□□□ -1.8
SMAD4-207ENST00000589076 ZPBPQ9BS86 351 aa3.82□□□□□ -1.8
SMAD4-207ENST00000589076 TRIM2Q9C040 744 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms