RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 A0A1B0GVM2 712 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 TCAF2A6NFQ2 919 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 RNF103O00237 685 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 RAMP2O60895 175 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 CCNCP24863 283 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 PAPOLAP51003 745 aaKnown RBP22.8■■□□□ 1.24
ATG4D-209ENST00000588857 ITGA8P53708 1063 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 ZNF177Q13360 481 aaPredicted RBP22.8■■□□□ 1.24
ATG4D-209ENST00000588857 ADAM15Q13444 863 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 COL19A1Q14993 1142 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 POLD3Q15054 466 aaPredicted RBP22.8■■□□□ 1.24
ATG4D-209ENST00000588857 PARP15Q460N3 678 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 SYCE2Q6PIF2 218 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 PCGF5Q86SE9 256 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 ARID3BQ8IVW6 561 aaPredicted RBP22.8■■□□□ 1.24
ATG4D-209ENST00000588857 CPXM2Q8N436 756 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 ZSCAN18Q8TBC5 510 aaPredicted RBP22.8■■□□□ 1.24
ATG4D-209ENST00000588857 CCDC110Q8TBZ0 833 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 AENQ8WTP8 325 aaKnown RBP22.8■■□□□ 1.24
ATG4D-209ENST00000588857 DEPDC1BQ8WUY9 529 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 TMA16Q96EY4 203 aaKnown RBP22.8■■□□□ 1.24
ATG4D-209ENST00000588857 NOL6Q9H6R4 1146 aaKnown RBP22.8■■□□□ 1.24
ATG4D-209ENST00000588857 ZDHHC18Q9NUE0 388 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 MTRF1LQ9UGC7 380 aaKnown RBP22.8■■□□□ 1.24
ATG4D-209ENST00000588857 CHD5Q8TDI0 1954 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 A0A0A0MRY4 1105 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 RASA4BC9J798 803 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 DNALI1O14645 258 aaPredicted RBP22.8■■□□□ 1.24
ATG4D-209ENST00000588857 RASA4O43374 803 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 TBL1XO60907 577 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 PRAMEF12O95522 483 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 ECHS1P30084 290 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 SGSHP51688 502 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 YBEYP58557 167 aaPredicted RBP22.8■■□□□ 1.24
ATG4D-209ENST00000588857 C6orf118Q5T5N4 469 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 TIGD7Q6NT04 549 aaPredicted RBP22.8■■□□□ 1.24
ATG4D-209ENST00000588857 EMBQ6PCB8 327 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 ZDHHC24Q6UX98 284 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 ARHGEF18Q6ZSZ5 1173 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 FBXO25Q8TCJ0 367 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 PABPC5Q96DU9 382 aaKnown RBP22.8■■□□□ 1.24
ATG4D-209ENST00000588857 SPATA13Q96N96 652 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 FMO2Q99518 471 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 NEUROG2Q9H2A3 272 aa22.8■■□□□ 1.24
ATG4D-209ENST00000588857 KCNK1O00180 336 aa22.79■■□□□ 1.24
ATG4D-209ENST00000588857 ZNF354CQ86Y25 554 aa22.79■■□□□ 1.24
ATG4D-209ENST00000588857 TAB3Q8N5C8 712 aaPredicted RBP22.79■■□□□ 1.24
ATG4D-209ENST00000588857 TDRD5Q8NAT2 981 aaKnown RBP22.79■■□□□ 1.24
ATG4D-209ENST00000588857 HMCESQ96FZ2 354 aa22.79■■□□□ 1.24
ATG4D-209ENST00000588857 COL25A1Q9BXS0 654 aaPredicted RBP22.79■■□□□ 1.24
ATG4D-209ENST00000588857 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.78■■□□□ 1.24
ATG4D-209ENST00000588857 DLL1O00548 723 aa22.78■■□□□ 1.24
ATG4D-209ENST00000588857 OPHN1O60890 802 aa22.78■■□□□ 1.24
ATG4D-209ENST00000588857 TCF3P15923 654 aa22.78■■□□□ 1.24
ATG4D-209ENST00000588857 WEE1P30291 646 aa22.78■■□□□ 1.24
ATG4D-209ENST00000588857 BASP1P80723 227 aaKnown RBP22.78■■□□□ 1.24
ATG4D-209ENST00000588857 WASHC5Q12768 1159 aa22.78■■□□□ 1.24
ATG4D-209ENST00000588857 ANKRD20A2Q5SQ80 823 aa22.78■■□□□ 1.24
ATG4D-209ENST00000588857 ANKRD20A1Q5TYW2 823 aa22.78■■□□□ 1.24
ATG4D-209ENST00000588857 ANKRD20A3Q5VUR7 823 aa22.78■■□□□ 1.24
ATG4D-209ENST00000588857 CES5AQ6NT32 575 aa22.78■■□□□ 1.24
ATG4D-209ENST00000588857 ARHGAP36Q6ZRI8 547 aa22.78■■□□□ 1.24
ATG4D-209ENST00000588857 SETD3Q86TU7 594 aaPredicted RBP22.78■■□□□ 1.24
ATG4D-209ENST00000588857 CELF5Q8N6W0 485 aaKnown RBP22.78■■□□□ 1.24
ATG4D-209ENST00000588857 DDI1Q8WTU0 396 aa22.78■■□□□ 1.24
ATG4D-209ENST00000588857 VAT1Q99536 393 aa22.78■■□□□ 1.24
ATG4D-209ENST00000588857 ADAM7Q9H2U9 754 aa22.78■■□□□ 1.24
ATG4D-209ENST00000588857 KIF9Q9HAQ2 790 aa22.78■■□□□ 1.24
ATG4D-209ENST00000588857 IPO11Q9UI26 975 aaKnown RBP22.78■■□□□ 1.24
ATG4D-209ENST00000588857 GFRA2O00451 464 aa22.77■■□□□ 1.24
ATG4D-209ENST00000588857 MAFKO60675 156 aa22.77■■□□□ 1.24
ATG4D-209ENST00000588857 CYBBP04839 570 aa22.77■■□□□ 1.24
ATG4D-209ENST00000588857 RHOCP08134 193 aa22.77■■□□□ 1.24
ATG4D-209ENST00000588857 BMP1P13497 986 aa22.77■■□□□ 1.24
ATG4D-209ENST00000588857 MORF4L2Q15014 288 aa22.77■■□□□ 1.24
ATG4D-209ENST00000588857 ZNF77Q15935 545 aa22.77■■□□□ 1.24
ATG4D-209ENST00000588857 CTC1Q2NKJ3 1217 aa22.77■■□□□ 1.24
ATG4D-209ENST00000588857 MPPE1Q53F39 396 aa22.77■■□□□ 1.24
ATG4D-209ENST00000588857 ATAT1Q5SQI0 421 aa22.77■■□□□ 1.24
ATG4D-209ENST00000588857 BEND6Q5SZJ8 279 aaPredicted RBP22.77■■□□□ 1.24
ATG4D-209ENST00000588857 EP400NLQ6ZTU2 488 aa22.77■■□□□ 1.24
ATG4D-209ENST00000588857 NPAS3Q8IXF0 933 aa22.77■■□□□ 1.24
ATG4D-209ENST00000588857 PPIL6Q8IXY8 311 aa22.77■■□□□ 1.24
ATG4D-209ENST00000588857 MAGEH1Q9H213 219 aa22.77■■□□□ 1.24
ATG4D-209ENST00000588857 RAB6BQ9NRW1 208 aa22.77■■□□□ 1.24
ATG4D-209ENST00000588857 KLHL8Q9P2G9 620 aaPredicted RBP22.77■■□□□ 1.24
ATG4D-209ENST00000588857 TBC1D14Q9P2M4 693 aa22.77■■□□□ 1.24
ATG4D-209ENST00000588857 H0Y626 953 aa22.76■■□□□ 1.23
ATG4D-209ENST00000588857 MATN3O15232 486 aa22.76■■□□□ 1.23
ATG4D-209ENST00000588857 FAM153BP0C7A2 387 aa22.76■■□□□ 1.23
ATG4D-209ENST00000588857 KCNA5P22460 613 aa22.76■■□□□ 1.23
ATG4D-209ENST00000588857 PTPN3P26045 913 aa22.76■■□□□ 1.23
ATG4D-209ENST00000588857 TNNT3P45378 269 aaPredicted RBP22.76■■□□□ 1.23
ATG4D-209ENST00000588857 GNA12Q03113 381 aa22.76■■□□□ 1.23
ATG4D-209ENST00000588857 USP4Q13107 963 aa22.76■■□□□ 1.23
ATG4D-209ENST00000588857 ANO4Q32M45 955 aa22.76■■□□□ 1.23
ATG4D-209ENST00000588857 FAM153CQ494X1 144 aa22.76■■□□□ 1.23
ATG4D-209ENST00000588857 RNASEH2BQ5TBB1 312 aaKnown RBP22.76■■□□□ 1.23
ATG4D-209ENST00000588857 HIBCHQ6NVY1 386 aaPredicted RBP22.76■■□□□ 1.23
ATG4D-209ENST00000588857 GET4Q7L5D6 327 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms