RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 IZUMO3Q5VZ72 239 aa10.82□□□□□ -0.68
NEDD4L-224ENST00000588712 FBXO38Q6PIJ6 1188 aa10.82□□□□□ -0.68
NEDD4L-224ENST00000588712 TFAP2DQ7Z6R9 452 aa10.82□□□□□ -0.68
NEDD4L-224ENST00000588712 BBS5Q8N3I7 341 aa10.82□□□□□ -0.68
NEDD4L-224ENST00000588712 ZSCAN18Q8TBC5 510 aaPredicted RBP10.82□□□□□ -0.68
NEDD4L-224ENST00000588712 DDI1Q8WTU0 396 aa10.82□□□□□ -0.68
NEDD4L-224ENST00000588712 NECTIN4Q96NY8 510 aa10.82□□□□□ -0.68
NEDD4L-224ENST00000588712 GAS2L1Q99501 681 aaPredicted RBP10.82□□□□□ -0.68
NEDD4L-224ENST00000588712 TRPV4Q9HBA0 871 aa10.82□□□□□ -0.68
NEDD4L-224ENST00000588712 THG1LQ9NWX6 298 aaKnown RBP10.82□□□□□ -0.68
NEDD4L-224ENST00000588712 GRHL1Q9NZI5 618 aa10.82□□□□□ -0.68
NEDD4L-224ENST00000588712 IPO11Q9UI26 975 aaKnown RBP10.82□□□□□ -0.68
NEDD4L-224ENST00000588712 ATG2AQ2TAZ0 1938 aa10.82□□□□□ -0.68
NEDD4L-224ENST00000588712 ERI2A8K979 691 aaKnown RBP10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 RNF103O00237 685 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 GFRA2O00451 464 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 CHADO15335 359 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 TBL1XO60907 577 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 MAP3K6O95382 1288 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 RHOCP08134 193 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 CCNB1P14635 433 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 CEBPBP17676 345 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 VPS41P49754 854 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 ITGA8P53708 1063 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 USP4Q13107 963 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 SERINC3Q13530 473 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 PRPSAP1Q14558 356 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 ZNF77Q15935 545 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 CTC1Q2NKJ3 1217 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 HIBCHQ6NVY1 386 aaPredicted RBP10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 SYCE2Q6PIF2 218 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 PID1Q7Z2X4 250 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 ZNF354CQ86Y25 554 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 BBS7Q8IWZ6 715 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 CFAP52Q8N1V2 620 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 ITFG1Q8TB96 612 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 AENQ8WTP8 325 aaKnown RBP10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 SMARCD2Q92925 531 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 HINFPQ9BQA5 517 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 PHACTR1Q9C0D0 580 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 SP110Q9HB58 689 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 KLHL8Q9P2G9 620 aaPredicted RBP10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 IGSF9Q9P2J2 1179 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 MTCH2Q9Y6C9 303 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 MYO9BQ13459 2157 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 HELZP42694 1942 aaKnown RBP10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 E7EVH7 732 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 AP3B1O00203 1094 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 LUC7L3O95232 432 aaKnown RBP10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 ZSCAN5DPP0CG00 497 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 CLCN6P51797 869 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 GEMIN4P57678 1058 aaKnown RBP10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 RPS24P62847 133 aaKnown RBP10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 BASP1P80723 227 aaKnown RBP10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 CDH18Q13634 790 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 RFTN1Q14699 578 aaPredicted RBP10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 SPDYCQ5MJ68 293 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 BEND6Q5SZJ8 279 aaPredicted RBP10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 HDXQ7Z353 690 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 METTL3Q86U44 580 aaKnown RBP10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 FBXO25Q8TCJ0 367 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 ING5Q8WYH8 240 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 FGF13Q92913 245 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 EXOC4Q96A65 974 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 PRICKLE1Q96MT3 831 aaPredicted RBP10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 C10orf88Q9H8K7 445 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 RAB6BQ9NRW1 208 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 ZDHHC18Q9NUE0 388 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 NDFIP2Q9NV92 336 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 SEPT10Q9P0V9 454 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 KIAA1522Q9P206 1035 aaPredicted RBP10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 CDH7Q9ULB5 785 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 COLQQ9Y215 455 aaPredicted RBP10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 NOTCH4Q99466 2003 aa10.81□□□□□ -0.68
NEDD4L-224ENST00000588712 KDELR3O43731 214 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 TSPAN3O60637 253 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 ETS1P14921 441 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 VAV1P15498 845 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 KCNA4P22459 653 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 PTPN3P26045 913 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 MAGEA6P43360 314 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 TNK2Q07912 1038 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 WASHC5Q12768 1159 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 CBX2Q14781 532 aaPredicted RBP10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 COL19A1Q14993 1142 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 RNASEH2BQ5TBB1 312 aaKnown RBP10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 MARC1Q5VT66 337 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 IL31Q6EBC2 164 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 MFN1Q8IWA4 741 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 NPAS3Q8IXF0 933 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 CARNMT1Q8N4J0 409 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 ZCCHC9Q8N567 271 aaKnown RBP10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 GLIS1Q8NBF1 620 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 TTC16Q8NEE8 873 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 FIBINQ8TAL6 211 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 CCDC110Q8TBZ0 833 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 BPIFB1Q8TDL5 484 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 MAML1Q92585 1016 aa10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 ARHGEF2Q92974 986 aaKnown RBP10.8□□□□□ -0.68
NEDD4L-224ENST00000588712 WBP2Q969T9 261 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms