RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 SPEM2Q0P670 501 aa13.65□□□□□ -0.22
SMARCA4-210ENST00000586892 CSRP2Q16527 193 aa13.65□□□□□ -0.22
SMARCA4-210ENST00000586892 ALKBH5Q6P6C2 394 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-210ENST00000586892 KIAA2013Q8IYS2 634 aa13.65□□□□□ -0.22
SMARCA4-210ENST00000586892 FRMD1Q8N878 549 aa13.65□□□□□ -0.22
SMARCA4-210ENST00000586892 DCAF4L2Q8NA75 395 aa13.65□□□□□ -0.22
SMARCA4-210ENST00000586892 TBC1D31Q96DN5 1066 aa13.65□□□□□ -0.22
SMARCA4-210ENST00000586892 NCAPGQ9BPX3 1015 aa13.65□□□□□ -0.22
SMARCA4-210ENST00000586892 TRIM5Q9C035 493 aa13.65□□□□□ -0.22
SMARCA4-210ENST00000586892 ARRDC1-AS1Q9H2J1 176 aa13.65□□□□□ -0.22
SMARCA4-210ENST00000586892 ABHD10Q9NUJ1 306 aa13.65□□□□□ -0.22
SMARCA4-210ENST00000586892 MYO1AQ9UBC5 1043 aa13.65□□□□□ -0.22
SMARCA4-210ENST00000586892 SLCO3A1Q9UIG8 710 aa13.65□□□□□ -0.22
SMARCA4-210ENST00000586892 FZD10Q9ULW2 581 aa13.65□□□□□ -0.22
SMARCA4-210ENST00000586892 USP18Q9UMW8 372 aa13.65□□□□□ -0.22
SMARCA4-210ENST00000586892 TNRC6BQ9UPQ9 1833 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 DCHS1Q96JQ0 3298 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 SSU72P8A0A1W2PR75 194 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 TTC34A8MYJ7 566 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 FAM72CH0Y354 149 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 RNASEH1O60930 286 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 MFAP3LO75121 409 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 SIN3BO75182 1162 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 IGLV3-19P01714 112 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 TGM1P22735 817 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 CD6P30203 668 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 OXTRP30559 389 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 ETFBP38117 255 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 EIF4A3P38919 411 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 MPLP40238 635 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 MAPKAPK2P49137 400 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 DHPSP49366 369 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 NUMBP49757 651 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 STK19P49842 368 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 TPMTP51580 245 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 CREB5Q02930 508 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 ZNF252P-AS1Q0IIN9 211 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 ACAP1Q15027 740 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 SLC18A3Q16572 532 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 CCDC122Q5T0U0 273 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 C9orf64Q5T6V5 341 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 FAM72AQ5TYM5 149 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 ZNF776Q68DI1 518 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 FAM72DQ6L9T8 149 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 RWDD4Q6NW29 188 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 FAM72BQ86X60 149 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 CNGA4Q8IV77 575 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 EPAS1Q99814 870 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 THAP2Q9H0W7 228 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 RSPH9Q9H1X1 276 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 DEF6Q9H4E7 631 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 PARD6AQ9NPB6 346 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 SEMA4GQ9NTN9 838 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 TMEM248Q9NWD8 314 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 SCML1Q9UN30 329 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 NEU3Q9UQ49 428 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 HS3ST2Q9Y278 367 aa13.64□□□□□ -0.23
SMARCA4-210ENST00000586892 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 A0A0D9SEW6 157 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 BCLAF3A2AJT9 711 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 EIF3CLB5ME19 914 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 ATP9BO43861 1147 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 NDUFS2O75306 463 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 DNTTP04053 509 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 HTR7P34969 479 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 DPP6P42658 865 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 RPS14P62263 151 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 GNA12Q03113 381 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 LMNB2Q03252 620 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 MAPK8IP2Q13387 824 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 ELAVL3Q14576 367 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 TTC31Q49AM3 519 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 PLA2G2CQ5R387 149 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 LYSMD4Q5XG99 296 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 CYP2U1Q7Z449 544 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 NLRP14Q86W24 1093 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 CACUL1Q86Y37 369 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 TMEFF1Q8IYR6 380 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 SH2D3CQ8N5H7 860 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 FRS2Q8WU20 508 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 PSMB7Q99436 277 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 EIF3CQ99613 913 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 TRIM7Q9C029 511 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 MTG2Q9H4K7 406 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 CD93Q9NPY3 652 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 VPS45Q9NRW7 570 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 WSB2Q9NYS7 404 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 VPS51Q9UID3 782 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 NENFQ9UMX5 172 aa13.63□□□□□ -0.23
SMARCA4-210ENST00000586892 CXorf51AA0A1B0GTR3 108 aa13.62□□□□□ -0.23
SMARCA4-210ENST00000586892 AKR1B15C9JRZ8 316 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-210ENST00000586892 CREB3O43889 395 aa13.62□□□□□ -0.23
SMARCA4-210ENST00000586892 PRPSAP2O60256 369 aa13.62□□□□□ -0.23
SMARCA4-210ENST00000586892 LRCH4O75427 683 aa13.62□□□□□ -0.23
SMARCA4-210ENST00000586892 CYP1A2P05177 515 aa13.62□□□□□ -0.23
SMARCA4-210ENST00000586892 ZNF806P0C7X5 589 aa13.62□□□□□ -0.23
SMARCA4-210ENST00000586892 EPHB2P29323 1055 aa13.62□□□□□ -0.23
SMARCA4-210ENST00000586892 HOXD12P35452 270 aa13.62□□□□□ -0.23
SMARCA4-210ENST00000586892 PCK1P35558 622 aa13.62□□□□□ -0.23
SMARCA4-210ENST00000586892 PI4KAP42356 2102 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms