RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 SLC7A4O43246 635 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 SART1O43290 800 aaKnown RBP13.99□□□□□ -0.17
SS18-222ENST00000582792 BRINP1O60477 761 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 MAGEC1O60732 1142 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 APOEP02649 317 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 VAV1P15498 845 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 GLDCP23378 1020 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 ACP1P24666 158 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 NUDT1P36639 197 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 RPL34P49207 117 aaKnown RBP13.99□□□□□ -0.17
SS18-222ENST00000582792 FMO5P49326 533 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 PMS1P54277 932 aaKnown RBP13.99□□□□□ -0.17
SS18-222ENST00000582792 LRRC63Q05C16 580 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 OVGP1Q12889 678 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 SLC12A1Q13621 1099 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 PROX2Q3B8N5 592 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 RAP1GAP2Q684P5 730 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.99□□□□□ -0.17
SS18-222ENST00000582792 BEND5Q7L4P6 421 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 CHSY1Q86X52 802 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 PPM1KQ8N3J5 372 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 FGF11Q92914 225 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 KAT5Q92993 513 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 FAM149B1Q96BN6 582 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 NT5C1BQ96P26 610 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 SPAG5Q96R06 1193 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 TJP2Q9UDY2 1190 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 CYTH4Q9UIA0 394 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 CLCA2Q9UQC9 943 aa13.99□□□□□ -0.17
SS18-222ENST00000582792 TEX51A0A1B0GUA7 166 aa13.98□□□□□ -0.17
SS18-222ENST00000582792 BICDL2A1A5D9 508 aa13.98□□□□□ -0.17
SS18-222ENST00000582792 BIN1O00499 593 aa13.98□□□□□ -0.17
SS18-222ENST00000582792 PMM2O15305 246 aa13.98□□□□□ -0.17
SS18-222ENST00000582792 PLRG1O43660 514 aaKnown RBP13.98□□□□□ -0.17
SS18-222ENST00000582792 LETM1O95202 739 aaPredicted RBP13.98□□□□□ -0.17
SS18-222ENST00000582792 CALCAP01258 141 aa13.98□□□□□ -0.17
SS18-222ENST00000582792 TACR2P21452 398 aa13.98□□□□□ -0.17
SS18-222ENST00000582792 METAP1P53582 386 aa13.98□□□□□ -0.17
SS18-222ENST00000582792 INSM1Q01101 510 aaPredicted RBP13.98□□□□□ -0.17
SS18-222ENST00000582792 SULT2A1Q06520 285 aa13.98□□□□□ -0.17
SS18-222ENST00000582792 SYPL2Q5VXT5 272 aa13.98□□□□□ -0.17
SS18-222ENST00000582792 GPR155Q7Z3F1 870 aa13.98□□□□□ -0.17
SS18-222ENST00000582792 TRIM69Q86WT6 500 aa13.98□□□□□ -0.17
SS18-222ENST00000582792 DCBLD1Q8N8Z6 715 aa13.98□□□□□ -0.17
SS18-222ENST00000582792 FRS2Q8WU20 508 aa13.98□□□□□ -0.17
SS18-222ENST00000582792 BTN2A3PQ96KV6 586 aa13.98□□□□□ -0.17
SS18-222ENST00000582792 TRIM62Q9BVG3 475 aa13.98□□□□□ -0.17
SS18-222ENST00000582792 DACH1Q9UI36 760 aa13.98□□□□□ -0.17
SS18-222ENST00000582792 TRIM49BA6NDI0 452 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 CAPN9O14815 690 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 RTN2O75298 545 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 IGLV3-25P01717 112 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 CD44P16070 742 aaKnown RBP13.97□□□□□ -0.17
SS18-222ENST00000582792 PDGFRAP16234 1089 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 MAT2AP31153 395 aaKnown RBP13.97□□□□□ -0.17
SS18-222ENST00000582792 ACTN2P35609 894 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 GPD2P43304 727 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 ACADSBP45954 432 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 VASPP50552 380 aaPredicted RBP13.97□□□□□ -0.17
SS18-222ENST00000582792 PLK1P53350 603 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 TLE3Q04726 772 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 STAT4Q14765 748 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 TBC1D25Q3MII6 688 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 ZC3H12AQ5D1E8 599 aaKnown RBP13.97□□□□□ -0.17
SS18-222ENST00000582792 FAM46CQ5VWP2 391 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 DSG4Q86SJ6 1040 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 ERICH1Q86X53 443 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 CCAR2Q8N163 923 aaKnown RBP13.97□□□□□ -0.17
SS18-222ENST00000582792 OR8D1Q8WZ84 308 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 METTL14Q9HCE5 456 aaKnown RBP13.97□□□□□ -0.17
SS18-222ENST00000582792 ST7Q9NRC1 585 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 TMEM63CQ9P1W3 806 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 SARDHQ9UL12 918 aa13.97□□□□□ -0.17
SS18-222ENST00000582792 KCNU1A8MYU2 1149 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 F5H5T6 163 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 PRAMEF26H0Y7S4 382 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 SIGLEC6O43699 453 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 SDC3O75056 442 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 NUMBP49757 651 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 OXCT1P55809 520 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 E2F1Q01094 437 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 GCNT1Q02742 428 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 CCDC173Q0VFZ6 552 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 PAK1Q13153 545 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 ZNF211Q13398 564 aaPredicted RBP13.96□□□□□ -0.17
SS18-222ENST00000582792 EIF4EBP2Q13542 120 aaPredicted RBP13.96□□□□□ -0.17
SS18-222ENST00000582792 SETMARQ53H47 684 aaPredicted RBP13.96□□□□□ -0.17
SS18-222ENST00000582792 TTC39BQ5VTQ0 682 aaPredicted RBP13.96□□□□□ -0.17
SS18-222ENST00000582792 AGBL4Q5VU57 503 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 ISM2Q6H9L7 571 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 CXorf57Q6NSI4 855 aaKnown RBP13.96□□□□□ -0.17
SS18-222ENST00000582792 CIR1Q86X95 450 aaPredicted RBP13.96□□□□□ -0.17
SS18-222ENST00000582792 SPACA3Q8IXA5 215 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 ZNF843Q8N446 348 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 ATP6V0D2Q8N8Y2 350 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 LMO3Q8TAP4 145 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 NELFBQ8WX92 580 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 CEP63Q96MT8 703 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 PRMT1Q99873 361 aaKnown RBP13.96□□□□□ -0.17
SS18-222ENST00000582792 POPDC2Q9HBU9 364 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms