RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 XPO6Q96QU8 1125 aaKnown RBP9.77□□□□□ -0.85
RFFL-210ENST00000582308 NAP1L3Q99457 506 aaPredicted RBP9.77□□□□□ -0.85
RFFL-210ENST00000582308 TUBB2BQ9BVA1 445 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 AP1M1Q9BXS5 423 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 ACE2Q9BYF1 805 aaPredicted RBP9.77□□□□□ -0.85
RFFL-210ENST00000582308 MAGEH1Q9H213 219 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 CD320Q9NPF0 282 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 SLC2A4RGQ9NR83 387 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 ABCB8Q9NUT2 735 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 DNAJC17Q9NVM6 304 aaKnown RBP9.77□□□□□ -0.85
RFFL-210ENST00000582308 RNF14Q9UBS8 474 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 INTS6Q9UL03 887 aaKnown RBP9.77□□□□□ -0.85
RFFL-210ENST00000582308 MRFAP1Q9Y605 127 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 ARHGAP42A6NI28 874 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 SPECC1L-ADORA2AF8WAN1 911 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 DFFAO00273 331 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 KRIT1O00522 736 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 PABPC1P11940 636 aaKnown RBP9.76□□□□□ -0.85
RFFL-210ENST00000582308 GLDCP23378 1020 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 GARSP41250 739 aaKnown RBP9.76□□□□□ -0.85
RFFL-210ENST00000582308 PAFAH1B1P43034 410 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 DGKGP49619 791 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 PLK1P53350 603 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 OXCT1P55809 520 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 EIF3EP60228 445 aaKnown RBP9.76□□□□□ -0.85
RFFL-210ENST00000582308 SERINC3Q13530 473 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 PDK1Q15118 436 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 CCNG2Q16589 344 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 GEN1Q17RS7 908 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 PARP15Q460N3 678 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 DNTTIP2Q5QJE6 756 aaKnown RBP9.76□□□□□ -0.85
RFFL-210ENST00000582308 TMEM215Q68D42 235 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 ARHGAP36Q6ZRI8 547 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 ADIPOR2Q86V24 386 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 ZC3H18Q86VM9 953 aaKnown RBP9.76□□□□□ -0.85
RFFL-210ENST00000582308 RNF135Q8IUD6 432 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 CCDC117Q8IWD4 279 aaPredicted RBP9.76□□□□□ -0.85
RFFL-210ENST00000582308 SFTPA1Q8IWL2 248 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.76□□□□□ -0.85
RFFL-210ENST00000582308 TTC13Q8NBP0 860 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 SLC35B2Q8TB61 432 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 MAIP1Q8WWC4 291 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 DNASE1L2Q92874 299 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 TSGA13Q96PP4 275 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 LGMNQ99538 433 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 SPON2Q9BUD6 331 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 MUC3BQ9H195 1237 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 C10orf88Q9H8K7 445 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 FBRSL1Q9HCM7 1045 aaKnown RBP9.76□□□□□ -0.85
RFFL-210ENST00000582308 HEBP1Q9NRV9 189 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 DEC1Q9P2X7 70 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 GGA2Q9UJY4 613 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 DNPEPQ9ULA0 475 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 DUSP12Q9UNI6 340 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 SORCS3Q9UPU3 1222 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 SLC27A6Q9Y2P4 619 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 RAD54BQ9Y620 910 aa9.76□□□□□ -0.85
RFFL-210ENST00000582308 SHISA7A6NL88 538 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 J3KR12 359 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 NCAM2O15394 837 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 KDELR3O43731 214 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 LIASO43766 372 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 SNAP91O60641 907 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 MAFKO60675 156 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 ZMPSTE24O75844 475 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 MX2P20592 715 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 CTHP32929 405 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 EIF2DP41214 584 aaKnown RBP9.75□□□□□ -0.85
RFFL-210ENST00000582308 GALK1P51570 392 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 PFKPQ01813 784 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 KDSRQ06136 332 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 PPIDQ08752 370 aaKnown RBP9.75□□□□□ -0.85
RFFL-210ENST00000582308 XRCC4Q13426 336 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 SNX1Q13596 522 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 SLC12A1Q13621 1099 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 DMC1Q14565 340 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 PRKD1Q15139 912 aaPredicted RBP9.75□□□□□ -0.85
RFFL-210ENST00000582308 OASLQ15646 514 aaKnown RBP9.75□□□□□ -0.85
RFFL-210ENST00000582308 CYP1B1Q16678 543 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 WHAMMP3Q1A5X7 153 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 PLEKHG6Q3KR16 790 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 FUT11Q495W5 492 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 SLC44A4Q53GD3 710 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 PITRM1Q5JRX3 1037 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 GRAMD4Q6IC98 578 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 TXNDC11Q6PKC3 985 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 BZW1Q7L1Q6 419 aaKnown RBP9.75□□□□□ -0.85
RFFL-210ENST00000582308 ZNF572Q7Z3I7 529 aaPredicted RBP9.75□□□□□ -0.85
RFFL-210ENST00000582308 RALGPS2Q86X27 583 aaPredicted RBP9.75□□□□□ -0.85
RFFL-210ENST00000582308 LRRC49Q8IUZ0 686 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 ZNF557Q8N988 423 aaPredicted RBP9.75□□□□□ -0.85
RFFL-210ENST00000582308 NKD2Q969F2 451 aaPredicted RBP9.75□□□□□ -0.85
RFFL-210ENST00000582308 HDAC11Q96DB2 347 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 NECAB3Q96P71 396 aaPredicted RBP9.75□□□□□ -0.85
RFFL-210ENST00000582308 PNKPQ96T60 521 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 FRMD8P1Q9BZ68 369 aaPredicted RBP9.75□□□□□ -0.85
RFFL-210ENST00000582308 C8orf33Q9H7E9 229 aaPredicted RBP9.75□□□□□ -0.85
RFFL-210ENST00000582308 ATP13A1Q9HD20 1204 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 RRAGDQ9NQL2 400 aaPredicted RBP9.75□□□□□ -0.85
RFFL-210ENST00000582308 IPO11Q9UI26 975 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms