RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 NUGGCQ68CJ6 796 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 SLC8B1Q6J4K2 584 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 FAM72DQ6L9T8 149 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 ITIH5Q86UX2 942 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 TAX1BP1Q86VP1 789 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 TMEM173Q86WV6 379 aaPredicted RBP9.52□□□□□ -0.89
SS18-220ENST00000582092 FAM72BQ86X60 149 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 ELMOD1Q8N336 334 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 OVCA2Q8WZ82 227 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 ARHGEF2Q92974 986 aaKnown RBP9.52□□□□□ -0.89
SS18-220ENST00000582092 MRRFQ96E11 262 aaKnown RBP9.52□□□□□ -0.89
SS18-220ENST00000582092 RIPOR3Q96MK2 946 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 OLFM3Q96PB7 478 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 CYTH2Q99418 400 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 DDX50Q9BQ39 737 aaKnown RBP9.52□□□□□ -0.89
SS18-220ENST00000582092 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.52□□□□□ -0.89
SS18-220ENST00000582092 NKIRAS1Q9NYS0 192 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 IL37Q9NZH6 218 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 CLEC1BQ9P126 229 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 SAMD15Q9P1V8 674 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 HSFX1Q9UBD0 423 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 TBK1Q9UHD2 729 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 SLC24A2Q9UI40 661 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 CHMP2BQ9UQN3 213 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 SNX10Q9Y5X0 201 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 HCFC2Q9Y5Z7 792 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 MYO10Q9HD67 2058 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 WDR27A2RRH5 827 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 SDR42E2A6NKP2 422 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 E9PAM4 449 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 TRDMT1O14717 391 aaKnown RBP9.51□□□□□ -0.89
SS18-220ENST00000582092 TLR5O60602 858 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 CLASP2O75122 1294 aaKnown RBP9.51□□□□□ -0.89
SS18-220ENST00000582092 GLP2RO95838 553 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 C1RP00736 705 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 IGLV3-25P01717 112 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 INHBAP08476 426 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 CCNCP24863 283 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 MDH1P40925 334 aaKnown RBP9.51□□□□□ -0.89
SS18-220ENST00000582092 GARSP41250 739 aaKnown RBP9.51□□□□□ -0.89
SS18-220ENST00000582092 ELK3P41970 407 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 MLLT6P55198 1093 aaPredicted RBP9.51□□□□□ -0.89
SS18-220ENST00000582092 USP46P62068 366 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 ZP2Q05996 745 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 ZNF33AQ06730 810 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 PPIDQ08752 370 aaKnown RBP9.51□□□□□ -0.89
SS18-220ENST00000582092 SEMA3BQ13214 749 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 AUHQ13825 339 aaKnown RBP9.51□□□□□ -0.89
SS18-220ENST00000582092 CBX2Q14781 532 aaPredicted RBP9.51□□□□□ -0.89
SS18-220ENST00000582092 ATAT1Q5SQI0 421 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 CHSY1Q86X52 802 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 CCNJLQ8IV13 435 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 CTAGE3PQ8IX95 158 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 TTC9BQ8N6N2 239 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 DNAAF3Q8N9W5 541 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 FBF1Q8TES7 1133 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 LRRN4Q8WUT4 740 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 BCL7CQ8WUZ0 217 aaPredicted RBP9.51□□□□□ -0.89
SS18-220ENST00000582092 HDAC11Q96DB2 347 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 CELF6Q96J87 481 aaKnown RBP9.51□□□□□ -0.89
SS18-220ENST00000582092 KLHL5Q96PQ7 755 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 PHF7Q9BWX1 381 aaPredicted RBP9.51□□□□□ -0.89
SS18-220ENST00000582092 ZYG11BQ9C0D3 744 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 EPB41L4BQ9H329 900 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 SFXN1Q9H9B4 322 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 LRRC4CQ9HCJ2 640 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.51□□□□□ -0.89
SS18-220ENST00000582092 SENP1Q9P0U3 644 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 FNIP2Q9P278 1114 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 PSMC3IPQ9P2W1 217 aaPredicted RBP9.51□□□□□ -0.89
SS18-220ENST00000582092 ZC3H7BQ9UGR2 993 aaKnown RBP9.51□□□□□ -0.89
SS18-220ENST00000582092 HBS1LQ9Y450 684 aaKnown RBP9.51□□□□□ -0.89
SS18-220ENST00000582092 MFHAS1Q9Y4C4 1052 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 USP15Q9Y4E8 981 aaPredicted RBP9.51□□□□□ -0.89
SS18-220ENST00000582092 TTLL3Q9Y4R7 772 aa9.51□□□□□ -0.89
SS18-220ENST00000582092 IQANK1A0A1B0GTG1 560 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 TCRBV7S3A2A0A539 114 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 FAM92AA1XBS5 289 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 ERI2A8K979 691 aaKnown RBP9.5□□□□□ -0.89
SS18-220ENST00000582092 RASA4BC9J798 803 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 E7ESA3 106 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 F5H423 210 aaPredicted RBP9.5□□□□□ -0.89
SS18-220ENST00000582092 F5H5T6 163 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 KCNK1O00180 336 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 TP73O15350 636 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 RASA4O43374 803 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 ANXA9O76027 345 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 METTL18O95568 372 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 GLUD1P00367 558 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 JCHAINP01591 159 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 LRG1P02750 347 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 CNPP09543 421 aaKnown RBP9.5□□□□□ -0.89
SS18-220ENST00000582092 MLNP12872 115 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 RHOQP17081 205 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 MAGEA6P43360 314 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 MMP13P45452 471 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 NRLP54845 237 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 IFI35P80217 286 aaPredicted RBP9.5□□□□□ -0.89
SS18-220ENST00000582092 NRG1Q02297 640 aaPredicted RBP9.5□□□□□ -0.89
SS18-220ENST00000582092 RING1Q06587 406 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms