RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 HADHQ16836 314 aaKnown RBP10.17□□□□□ -0.78
GGA3-209ENST00000580646 C11orf63Q6NUN7 778 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 SCYL2Q6P3W7 929 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 ZNF783Q6ZMS7 281 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 DGLUCYQ7Z3D6 616 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 SETD3Q86TU7 594 aaPredicted RBP10.17□□□□□ -0.78
GGA3-209ENST00000580646 CCDC117Q8IWD4 279 aaPredicted RBP10.17□□□□□ -0.78
GGA3-209ENST00000580646 CHPFQ8IZ52 775 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 CCAR2Q8N163 923 aaKnown RBP10.17□□□□□ -0.78
GGA3-209ENST00000580646 PGBD3Q8N328 593 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 ACRBPQ8NEB7 543 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 FAM71BQ8TC56 605 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 WFIKKN2Q8TEU8 576 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 HMGB4Q8WW32 186 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 IGSF8Q969P0 613 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 RPRD1AQ96P16 312 aaPredicted RBP10.17□□□□□ -0.78
GGA3-209ENST00000580646 PPP1R9BQ96SB3 815 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 EPAS1Q99814 870 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 TSGA10Q9BZW7 698 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 ZYG11BQ9C0D3 744 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 SIK2Q9H0K1 926 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 DONSONQ9NYP3 566 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 BCCIPQ9P287 314 aaKnown RBP eCLIP10.17□□□□□ -0.78
GGA3-209ENST00000580646 CDV3Q9UKY7 258 aaKnown RBP10.17□□□□□ -0.78
GGA3-209ENST00000580646 AP4E1Q9UPM8 1137 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 TBC1D30Q9Y2I9 924 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 ADGRG1Q9Y653 693 aa10.17□□□□□ -0.78
GGA3-209ENST00000580646 CXorf51AA0A1B0GTR3 108 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.16□□□□□ -0.78
GGA3-209ENST00000580646 A0A1W2PQF6 199 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 RCCD1A6NED2 376 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 WASH4PA8MWX3 477 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 FGF10O15520 208 aaPredicted RBP10.16□□□□□ -0.78
GGA3-209ENST00000580646 ZBTB24O43167 697 aaPredicted RBP10.16□□□□□ -0.78
GGA3-209ENST00000580646 TIMM44O43615 452 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 TSPAN3O60637 253 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 LRIG2O94898 1065 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 KRT7P08729 469 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 BCKDHBP21953 392 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 MPLP40238 635 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 P2RY2P41231 377 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 HCAR3P49019 387 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 MAPKAPK2P49137 400 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 PLK1P53350 603 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 RPS24P62847 133 aaKnown RBP10.16□□□□□ -0.78
GGA3-209ENST00000580646 CDH18Q13634 790 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 BYSLQ13895 437 aaKnown RBP10.16□□□□□ -0.78
GGA3-209ENST00000580646 SF3A2Q15428 464 aaKnown RBP10.16□□□□□ -0.78
GGA3-209ENST00000580646 GEN1Q17RS7 908 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 PLA2G2CQ5R387 149 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 LRRC38Q5VT99 294 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 PMS2CLQ68D20 193 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 ANKS1BQ7Z6G8 1248 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 C14orf80Q86SX3 495 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 KIAA1328Q86T90 577 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 VSIG1Q86XK7 387 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 MFN1Q8IWA4 741 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 AHI1Q8N157 1196 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 RNF10Q8N5U6 811 aaKnown RBP10.16□□□□□ -0.78
GGA3-209ENST00000580646 NETO1Q8TDF5 533 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 RLN3Q8WXF3 142 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 TBC1D31Q96DN5 1066 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 MYEOVQ96EZ4 313 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 BTBD6Q96KE9 485 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 LMLNQ96KR4 655 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 SPACA7Q96KW9 195 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 PEBP4Q96S96 227 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 GABRG3Q99928 467 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 SNRNP25Q9BV90 132 aaKnown RBP10.16□□□□□ -0.78
GGA3-209ENST00000580646 TMPRSS4Q9NRS4 437 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 TMEM248Q9NWD8 314 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 CACNA2D2Q9NY47 1150 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 KIAA1522Q9P206 1035 aaPredicted RBP10.16□□□□□ -0.78
GGA3-209ENST00000580646 RCOR3Q9P2K3 495 aaPredicted RBP10.16□□□□□ -0.78
GGA3-209ENST00000580646 ZNF212Q9UDV6 495 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 RALYQ9UKM9 306 aaKnown RBP10.16□□□□□ -0.78
GGA3-209ENST00000580646 CLEC4EQ9ULY5 219 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 NEU3Q9UQ49 428 aa10.16□□□□□ -0.78
GGA3-209ENST00000580646 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.15□□□□□ -0.78
GGA3-209ENST00000580646 BCLAF3A2AJT9 711 aaKnown RBP10.15□□□□□ -0.78
GGA3-209ENST00000580646 ZNF487B1APH4 448 aa10.15□□□□□ -0.78
GGA3-209ENST00000580646 WASH3PC4AMC7 463 aa10.15□□□□□ -0.78
GGA3-209ENST00000580646 H0Y626 953 aa10.15□□□□□ -0.78
GGA3-209ENST00000580646 MAP3K13O43283 966 aa10.15□□□□□ -0.78
GGA3-209ENST00000580646 KRT86O43790 486 aa10.15□□□□□ -0.78
GGA3-209ENST00000580646 GDF9O60383 454 aa10.15□□□□□ -0.78
GGA3-209ENST00000580646 CCDC175P0C221 793 aa10.15□□□□□ -0.78
GGA3-209ENST00000580646 PABPC1P11940 636 aaKnown RBP10.15□□□□□ -0.78
GGA3-209ENST00000580646 RHOQP17081 205 aa10.15□□□□□ -0.78
GGA3-209ENST00000580646 GABRG2P18507 467 aa10.15□□□□□ -0.78
GGA3-209ENST00000580646 IL1R2P27930 398 aa10.15□□□□□ -0.78
GGA3-209ENST00000580646 HLA-FP30511 346 aa10.15□□□□□ -0.78
GGA3-209ENST00000580646 NOP2P46087 812 aaKnown RBP10.15□□□□□ -0.78
GGA3-209ENST00000580646 VASPP50552 380 aaPredicted RBP10.15□□□□□ -0.78
GGA3-209ENST00000580646 CREB5Q02930 508 aa10.15□□□□□ -0.78
GGA3-209ENST00000580646 ZNF177Q13360 481 aaPredicted RBP10.15□□□□□ -0.78
GGA3-209ENST00000580646 MESDQ14696 234 aa10.15□□□□□ -0.78
GGA3-209ENST00000580646 MAP7D1Q3KQU3 841 aa10.15□□□□□ -0.78
GGA3-209ENST00000580646 AASDHQ4L235 1098 aaPredicted RBP10.15□□□□□ -0.78
GGA3-209ENST00000580646 C6orf118Q5T5N4 469 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms