RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 PECAM1P16284 738 aaPredicted RBP16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 ACVRL1P37023 503 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 NR2C2P49116 596 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 GALK1P51570 392 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 MESP2Q0VG99 397 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 CCDC181Q5TID7 509 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 CREG2Q8IUH2 290 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 APCDD1Q8J025 514 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 AHI1Q8N157 1196 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 TERB1Q8NA31 727 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 OR7D4Q8NG98 312 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 ACTRT1Q8TDG2 376 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 P3H4Q92791 437 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 HAUS1Q96CS2 278 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 HMCESQ96FZ2 354 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 ACE2Q9BYF1 805 aaPredicted RBP16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 MUC3BQ9H195 1237 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 FBRSL1Q9HCM7 1045 aaKnown RBP16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 SAE1Q9UBE0 346 aaPredicted RBP16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 WNT16Q9UBV4 365 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 INTS6Q9UL03 887 aaKnown RBP16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 RAD54BQ9Y620 910 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 ARHGAP42A6NI28 874 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 SHISA7A6NL88 538 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 ETFBP38117 255 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 PAPOLAP51003 745 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 KDSRQ06136 332 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 GALNT2Q10471 571 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 DMC1Q14565 340 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 SIX1Q15475 284 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 MLF2Q15773 248 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 LONRF2Q1L5Z9 754 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 PLEKHG6Q3KR16 790 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 FUT11Q495W5 492 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 PREPLQ4J6C6 727 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 PITRM1Q5JRX3 1037 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 TMEM215Q68D42 235 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 TPRG1Q6ZUI0 275 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 ADAT2Q7Z6V5 191 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 ADIPOR2Q86V24 386 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 SUGP1Q8IWZ8 645 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 KIF18AQ8NI77 898 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 ACTL9Q8TC94 416 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 WFIKKN2Q8TEU8 576 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 OLFM3Q96PB7 478 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 P2RY13Q9BPV8 354 aa16.28■□□□□ 0.2
CSNK1D-212ENST00000580061 TRIOO75962 3097 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 A0A0A0MRY4 1105 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 PRRT4C9JH25 899 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 PGRMC1O00264 195 aaKnown RBP16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 DFFAO00273 331 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 KAT7O95251 611 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 GRIA2P42262 883 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 NUMBP49757 651 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 OTUD4Q01804 1114 aaKnown RBP16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 PRKCQQ04759 706 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 SERINC3Q13530 473 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 NOMO1Q15155 1222 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 IL31Q6EBC2 164 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 BZW1Q7L1Q6 419 aaKnown RBP16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 CCDC33Q8N5R6 958 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 DCAF4L2Q8NA75 395 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 TTC13Q8NBP0 860 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 MAIP1Q8WWC4 291 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 EXOC4Q96A65 974 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 CAPZA3Q96KX2 299 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 UHRF1Q96T88 793 aaPredicted RBP16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 NAP1L3Q99457 506 aaPredicted RBP16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 SPON2Q9BUD6 331 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 ATP13A1Q9HD20 1204 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 ARHGEF3Q9NR81 526 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 SMARCAL1Q9NZC9 954 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 RNF14Q9UBS8 474 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 VPS28Q9UK41 221 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 CA14Q9ULX7 337 aa16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 R3HDM2Q9Y2K5 976 aaKnown RBP16.27■□□□□ 0.2
CSNK1D-212ENST00000580061 F5P12259 2224 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 MUC22E2RYF6 1773 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 KRBA1A5PL33 1030 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 MAN2B1O00754 1011 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 NCAM2O15394 837 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 KDELR3O43731 214 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 URI1O94763 535 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 APODP05090 189 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 MX2P20592 715 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 GLDCP23378 1020 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 GARSP41250 739 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 ARF5P84085 180 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 PON2Q15165 354 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 TMEM196Q5HYL7 178 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 MBLAC2Q68D91 279 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 ARHGAP36Q6ZRI8 547 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 ZNF354CQ86Y25 554 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 LRRC49Q8IUZ0 686 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 SFTPA1Q8IWL2 248 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 FAM3CQ92520 227 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 TTC17Q96AE7 1141 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 ACDQ96AP0 544 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 HDAC11Q96DB2 347 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 C2orf49Q9BVC5 232 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms