RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 A0A0A0MRY4 1105 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 H0Y626 953 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 HOXC11O43248 304 aaPredicted RBP15.63■□□□□ 0.09
SS18-206ENST00000577572 TBL1XO60907 577 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 ECI2O75521 394 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 NFATC1O95644 943 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 ADH1CP00326 375 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 LAMP2P13473 410 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 HOXD9P28356 352 aaPredicted RBP15.63■□□□□ 0.09
SS18-206ENST00000577572 ADCY8P40145 1251 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 IFNAR2P48551 515 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 PAPOLAP51003 745 aaKnown RBP15.63■□□□□ 0.09
SS18-206ENST00000577572 RENBPP51606 427 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 IRAK1P51617 712 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 PLK1P53350 603 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 SLC7A5Q01650 507 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 FCHO2Q0JRZ9 810 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 CALCOCO2Q13137 446 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 SMAD4Q13485 552 aaKnown RBP15.63■□□□□ 0.09
SS18-206ENST00000577572 CDH18Q13634 790 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 DMC1Q14565 340 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 ELF2Q15723 593 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 MAP9Q49MG5 647 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 FYB2Q5VWT5 728 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 POTEHQ6S545 545 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 CEP128Q6ZU80 1094 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 METTL3Q86U44 580 aaKnown RBP15.63■□□□□ 0.09
SS18-206ENST00000577572 MFSD6LQ8IWD5 586 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 ARHGEF2Q92974 986 aaKnown RBP15.63■□□□□ 0.09
SS18-206ENST00000577572 ATP2A3Q93084 1043 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 NXPE3Q969Y0 559 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 MYEOVQ96EZ4 313 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 SNF8Q96H20 258 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 LRCH3Q96II8 777 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 CELF6Q96J87 481 aaKnown RBP15.63■□□□□ 0.09
SS18-206ENST00000577572 SPATA13Q96N96 652 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 APOL5Q9BWW9 433 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 ACE2Q9BYF1 805 aaPredicted RBP15.63■□□□□ 0.09
SS18-206ENST00000577572 PARD6BQ9BYG5 372 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 FRMD8Q9BZ67 464 aaPredicted RBP15.63■□□□□ 0.09
SS18-206ENST00000577572 NDFIP2Q9NV92 336 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 ARGLU1Q9NWB6 273 aaPredicted RBP15.63■□□□□ 0.09
SS18-206ENST00000577572 DUS2Q9NX74 493 aaKnown RBP15.63■□□□□ 0.09
SS18-206ENST00000577572 MYO9BQ13459 2157 aa15.63■□□□□ 0.09
SS18-206ENST00000577572 NUP210Q8TEM1 1887 aaPredicted RBP15.63■□□□□ 0.09
SS18-206ENST00000577572 HELZP42694 1942 aaKnown RBP15.62■□□□□ 0.09
SS18-206ENST00000577572 CCDC151A5D8V7 595 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 HEPACAM2A8MVW5 462 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 DFFAO00273 331 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 DYNC1I1O14576 645 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 KDELR3O43731 214 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 TSPAN3O60637 253 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 ERLIN1O75477 346 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 IFNB1P01574 187 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 FCARP24071 287 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 IVDP26440 423 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 FDFT1P37268 417 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 GEMIN4P57678 1058 aaKnown RBP15.62■□□□□ 0.09
SS18-206ENST00000577572 SLC20A2Q08357 652 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 PARP6Q2NL67 630 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 TEX44Q53QW1 395 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 ITPRIPL1Q6GPH6 555 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 CXorf57Q6NSI4 855 aaKnown RBP15.62■□□□□ 0.09
SS18-206ENST00000577572 CCNI2Q6ZMN8 369 aaPredicted RBP15.62■□□□□ 0.09
SS18-206ENST00000577572 HOOK3Q86VS8 718 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 MFN1Q8IWA4 741 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 TEX26Q8N6G2 289 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 HNRNPLLQ8WVV9 542 aaKnown RBP15.62■□□□□ 0.09
SS18-206ENST00000577572 CASKIN2Q8WXE0 1202 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 ACDQ96AP0 544 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 HMCESQ96FZ2 354 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 CDX2Q99626 313 aaPredicted RBP15.62■□□□□ 0.09
SS18-206ENST00000577572 IL12RB2Q99665 862 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 IGSF9Q9P2J2 1179 aa15.62■□□□□ 0.09
SS18-206ENST00000577572 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.62■□□□□ 0.09
SS18-206ENST00000577572 V9GYY5 206 aaPredicted RBP15.62■□□□□ 0.09
SS18-206ENST00000577572 RNF103O00237 685 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 PRAMEF11O60813 436 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 SEC31AO94979 1220 aaKnown RBP15.61■□□□□ 0.09
SS18-206ENST00000577572 CCNB1P14635 433 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 VAV1P15498 845 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 GBP2P32456 591 aaPredicted RBP15.61■□□□□ 0.09
SS18-206ENST00000577572 RPL22P35268 128 aaKnown RBP15.61■□□□□ 0.09
SS18-206ENST00000577572 MAGEA6P43360 314 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 CLCN6P51797 869 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 GDF10P55107 478 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 CDK16Q00536 496 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 GAD2Q05329 585 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 WASHC5Q12768 1159 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 NR1H3Q13133 447 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 CBLBQ13191 982 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 MORF4L2Q15014 288 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 EML3Q32P44 896 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 PUS10Q3MIT2 529 aaKnown RBP15.61■□□□□ 0.09
SS18-206ENST00000577572 INO80DQ53TQ3 878 aaPredicted RBP15.61■□□□□ 0.09
SS18-206ENST00000577572 EP400NLQ6ZTU2 488 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 CIR1Q86X95 450 aaPredicted RBP15.61■□□□□ 0.09
SS18-206ENST00000577572 BBS5Q8N3I7 341 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.61■□□□□ 0.09
SS18-206ENST00000577572 DCAF4L2Q8NA75 395 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms