RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 RFWD3Q6PCD5 774 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 PRPF39Q86UA1 669 aaKnown RBP11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 ERICH1Q86X53 443 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 DHX40Q8IX18 779 aaKnown RBP11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 SPACA3Q8IXA5 215 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 LSMEM2Q8N112 164 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 ZNF248Q8NDW4 579 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 OR14C36Q8NHC7 312 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 WFDC5Q8TCV5 224 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 IRGQQ8WZA9 623 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 CCDC47Q96A33 483 aaKnown RBP11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 MRGPRX3Q96LB0 322 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 SPATA32Q96LK8 384 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 FAM129BQ96TA1 746 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 NAT10Q9H0A0 1025 aaKnown RBP11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 RASSF4Q9H2L5 321 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 KDM4CQ9H3R0 1056 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 ZNF446Q9NWS9 450 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 GEMIN8Q9NWZ8 242 aaKnown RBP11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 DNAI1Q9UI46 699 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 TSPAN16Q9UKR8 245 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 INTS6Q9UL03 887 aaKnown RBP11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 ERVW-1Q9UQF0 538 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.08□□□□□ -0.643e-7■■■□□ 15
CALCOCO2-228ENST00000576582 COL6A6A6NMZ7 2263 aa11.08□□□□□ -0.64
CALCOCO2-228ENST00000576582 MYO18BQ8IUG5 2567 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 TBC1D3DA0A087WVF3 549 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 TBC1D3IA0A087WXS9 549 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 TBC1D3EA0A087X179 549 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 TBC1D3KA0A087X1G2 549 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 GOLGA6L7A0A1B0GV03 622 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 GOLGA6L9A6NEM1 432 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 TBC1D3FA6NER0 549 aaPredicted RBP11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 TBC1D3LB9A6J9 549 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 MSI1O43347 362 aaKnown RBP11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 PRR29P0C7W0 189 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 TBC1D3HP0C7X1 549 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 SETSIPP0DME0 302 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 SLC6A4P31645 630 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 SYKP43405 635 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 CLCN6P51797 869 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 ADPRHP54922 357 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 HNRNPH2P55795 449 aaKnown RBP11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 DAOAP59103 153 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 YWHAEP62258 255 aaKnown RBP11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 CXADRP78310 365 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 ECT2LQ008S8 904 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 INSM1Q01101 510 aaPredicted RBP11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 ADIGQ0VDE8 80 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 KCNH2Q12809 1159 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 ZNF211Q13398 564 aaPredicted RBP11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 PROX2Q3B8N5 592 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 PKDCCQ504Y2 493 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 BROXQ5VW32 411 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 TBC1D3GQ6DHY5 549 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 TBC1D3CQ6IPX1 549 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 KANSL1Q7Z3B3 1105 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 TBC1D3Q8IZP1 549 aaPredicted RBP11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 GOLGA6L1Q8N7Z2 621 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 UBR7Q8N806 425 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 TATDN2Q93075 761 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 ZNF578Q96N58 590 aaPredicted RBP11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 MMRN2Q9H8L6 949 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 STIM2Q9P246 746 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 DMTF1Q9Y222 760 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 ITIH6Q6UXX5 1313 aa11.07□□□□□ -0.64
CALCOCO2-228ENST00000576582 EFCAB8A8MWE9 144 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 TTC34A8MYJ7 566 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 O00370 1275 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 SLC7A4O43246 635 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 MT-CO3P00414 261 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 IVLP07476 585 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 VDRP11473 427 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 NNMTP40261 264 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 NDUFA8P51970 172 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 TBX4P57082 545 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 PCBP4P57723 403 aaKnown RBP11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 CUL2Q13617 745 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 CDH18Q13634 790 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 ELAVL3Q14576 367 aaKnown RBP11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 STAT4Q14765 748 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 TAF1BQ53T94 588 aaPredicted RBP11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 PITRM1Q5JRX3 1037 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 RNF219Q5W0B1 726 aaPredicted RBP11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 PCSK4Q6UW60 755 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 KRBA2Q6ZNG9 492 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 SPATS2Q86XZ4 545 aaKnown RBP11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 CARNMT1Q8N4J0 409 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 AADATQ8N5Z0 425 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 LGMNQ99538 433 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 SLCO3A1Q9UIG8 710 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 MAPK8IP1Q9UQF2 711 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 ATMQ13315 3056 aa11.06□□□□□ -0.64
CALCOCO2-228ENST00000576582 A0A1W2PQ27 194 aa11.05□□□□□ -0.64
CALCOCO2-228ENST00000576582 A0A1W2PQ64 194 aa11.05□□□□□ -0.64
CALCOCO2-228ENST00000576582 CETN3O15182 167 aa11.05□□□□□ -0.64
CALCOCO2-228ENST00000576582 SLC16A3O15427 465 aaKnown RBP11.05□□□□□ -0.64
CALCOCO2-228ENST00000576582 RNGTTO60942 597 aaKnown RBP11.05□□□□□ -0.64
CALCOCO2-228ENST00000576582 DXOO77932 396 aaKnown RBP11.05□□□□□ -0.64
CALCOCO2-228ENST00000576582 IL1BP01584 269 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms