RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 KCND1Q9NSA2 647 aa8.79□□□□□ -1
NUP88-211ENST00000575976 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.79□□□□□ -1
NUP88-211ENST00000575976 HCN2Q9UL51 889 aa8.79□□□□□ -1
NUP88-211ENST00000575976 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.79□□□□□ -1
NUP88-211ENST00000575976 OR51B4Q9Y5P0 310 aa8.79□□□□□ -1
NUP88-211ENST00000575976 ZNF487B1APH4 448 aa8.78□□□□□ -1
NUP88-211ENST00000575976 KIF5CO60282 957 aa8.78□□□□□ -1
NUP88-211ENST00000575976 RAMP2O60895 175 aa8.78□□□□□ -1
NUP88-211ENST00000575976 PYGMP11217 842 aa8.78□□□□□ -1
NUP88-211ENST00000575976 KRT10P13645 584 aa8.78□□□□□ -1
NUP88-211ENST00000575976 POLR2EP19388 210 aaKnown RBP8.78□□□□□ -1
NUP88-211ENST00000575976 CDKN2BP42772 138 aa8.78□□□□□ -1
NUP88-211ENST00000575976 TNFRSF4P43489 277 aa8.78□□□□□ -1
NUP88-211ENST00000575976 NDST2P52849 883 aa8.78□□□□□ -1
NUP88-211ENST00000575976 PLK1P53350 603 aa8.78□□□□□ -1
NUP88-211ENST00000575976 NUBP1P53384 320 aa8.78□□□□□ -1
NUP88-211ENST00000575976 SEC13P55735 322 aa8.78□□□□□ -1
NUP88-211ENST00000575976 YBEYP58557 167 aaPredicted RBP8.78□□□□□ -1
NUP88-211ENST00000575976 GNA12Q03113 381 aa8.78□□□□□ -1
NUP88-211ENST00000575976 ZNF211Q13398 564 aaPredicted RBP8.78□□□□□ -1
NUP88-211ENST00000575976 CCINQ13939 588 aa8.78□□□□□ -1
NUP88-211ENST00000575976 DMC1Q14565 340 aa8.78□□□□□ -1
NUP88-211ENST00000575976 POLD3Q15054 466 aaPredicted RBP8.78□□□□□ -1
NUP88-211ENST00000575976 RPS6KA1Q15418 735 aa8.78□□□□□ -1
NUP88-211ENST00000575976 TAZQ16635 292 aa8.78□□□□□ -1
NUP88-211ENST00000575976 PLEKHG6Q3KR16 790 aa8.78□□□□□ -1
NUP88-211ENST00000575976 HS1BP3Q53T59 392 aa8.78□□□□□ -1
NUP88-211ENST00000575976 KAZNQ674X7 775 aa8.78□□□□□ -1
NUP88-211ENST00000575976 MBLAC2Q68D91 279 aa8.78□□□□□ -1
NUP88-211ENST00000575976 NCBP2-AS2Q69YL0 99 aa8.78□□□□□ -1
NUP88-211ENST00000575976 CWF19L1Q69YN2 538 aaKnown RBP8.78□□□□□ -1
NUP88-211ENST00000575976 AADACL2Q6P093 401 aa8.78□□□□□ -1
NUP88-211ENST00000575976 TMCO3Q6UWJ1 677 aa8.78□□□□□ -1
NUP88-211ENST00000575976 ZNF783Q6ZMS7 281 aa8.78□□□□□ -1
NUP88-211ENST00000575976 NUDT18Q6ZVK8 323 aa8.78□□□□□ -1
NUP88-211ENST00000575976 VSIG1Q86XK7 387 aa8.78□□□□□ -1
NUP88-211ENST00000575976 RFX6Q8HWS3 928 aa8.78□□□□□ -1
NUP88-211ENST00000575976 CCDC50Q8IVM0 306 aa8.78□□□□□ -1
NUP88-211ENST00000575976 ARHGAP12Q8IWW6 846 aa8.78□□□□□ -1
NUP88-211ENST00000575976 TP53INP2Q8IXH6 220 aa8.78□□□□□ -1
NUP88-211ENST00000575976 UMODL1-AS1Q8N2C9 162 aa8.78□□□□□ -1
NUP88-211ENST00000575976 NPWQ8N729 165 aa8.78□□□□□ -1
NUP88-211ENST00000575976 PQLC3Q8N755 202 aa8.78□□□□□ -1
NUP88-211ENST00000575976 UBL4BQ8N7F7 174 aa8.78□□□□□ -1
NUP88-211ENST00000575976 PJA1Q8NG27 643 aa8.78□□□□□ -1
NUP88-211ENST00000575976 CYB5D2Q8WUJ1 264 aa8.78□□□□□ -1
NUP88-211ENST00000575976 UBE2Q2Q8WVN8 375 aa8.78□□□□□ -1
NUP88-211ENST00000575976 SORCS1Q8WY21 1168 aa8.78□□□□□ -1
NUP88-211ENST00000575976 ARHGEF2Q92974 986 aaKnown RBP8.78□□□□□ -1
NUP88-211ENST00000575976 TTC17Q96AE7 1141 aa8.78□□□□□ -1
NUP88-211ENST00000575976 RBM41Q96IZ5 413 aaKnown RBP8.78□□□□□ -1
NUP88-211ENST00000575976 CELF6Q96J87 481 aaKnown RBP8.78□□□□□ -1
NUP88-211ENST00000575976 PSMB7Q99436 277 aa8.78□□□□□ -1
NUP88-211ENST00000575976 FEM1AQ9BSK4 669 aa8.78□□□□□ -1
NUP88-211ENST00000575976 SPON2Q9BUD6 331 aa8.78□□□□□ -1
NUP88-211ENST00000575976 MAK16Q9BXY0 300 aaKnown RBP8.78□□□□□ -1
NUP88-211ENST00000575976 CIPCQ9C0C6 399 aa8.78□□□□□ -1
NUP88-211ENST00000575976 SLC39A8Q9C0K1 460 aa8.78□□□□□ -1
NUP88-211ENST00000575976 MUC3BQ9H195 1237 aa8.78□□□□□ -1
NUP88-211ENST00000575976 MAGEH1Q9H213 219 aa8.78□□□□□ -1
NUP88-211ENST00000575976 ZDHHC4Q9NPG8 344 aa8.78□□□□□ -1
NUP88-211ENST00000575976 ELOVL2Q9NXB9 296 aa8.78□□□□□ -1
NUP88-211ENST00000575976 DONSONQ9NYP3 566 aa8.78□□□□□ -1
NUP88-211ENST00000575976 VPS28Q9UK41 221 aa8.78□□□□□ -1
NUP88-211ENST00000575976 ZKSCAN5Q9Y2L8 839 aa8.78□□□□□ -1
NUP88-211ENST00000575976 STARD13Q9Y3M8 1113 aa8.78□□□□□ -1
NUP88-211ENST00000575976 EPG5Q9HCE0 2579 aa8.78□□□□□ -1
NUP88-211ENST00000575976 hCG_1818297A0A087WSY0 165 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 RASA4BC9J798 803 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 ENC1O14682 589 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 APOL1O14791 398 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 NCAM2O15394 837 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 RASA4O43374 803 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 TIMM44O43615 452 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 PI15O43692 258 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 SNAP91O60641 907 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 RNF40O75150 1001 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 DCNP07585 359 aaKnown RBP8.77□□□□□ -1.01
NUP88-211ENST00000575976 CHRM1P11229 460 aaPredicted RBP8.77□□□□□ -1.01
NUP88-211ENST00000575976 GLDCP23378 1020 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 TIE1P35590 1138 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 CTSOP43234 321 aaPredicted RBP8.77□□□□□ -1.01
NUP88-211ENST00000575976 KIR2DL1P43626 348 aaPredicted RBP8.77□□□□□ -1.01
NUP88-211ENST00000575976 PAPOLAP51003 745 aaKnown RBP8.77□□□□□ -1.01
NUP88-211ENST00000575976 COPS2P61201 443 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 GNG11P61952 73 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 ADCY2Q08462 1091 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 TCF15Q12870 199 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 LRRC32Q14392 662 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 EIF4HQ15056 248 aaKnown RBP8.77□□□□□ -1.01
NUP88-211ENST00000575976 PAFAH1B3Q15102 231 aaKnown RBP8.77□□□□□ -1.01
NUP88-211ENST00000575976 PPP2R5EQ16537 467 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 FBXO43Q4G163 708 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 TFDP3Q5H9I0 405 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 DGKKQ5KSL6 1271 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 DCAF12L1Q5VU92 463 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 AFMIDQ63HM1 303 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 EGFLAMQ63HQ2 1017 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 SLC9A4Q6AI14 798 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 IL31Q6EBC2 164 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms