RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 LZTS3O60299 673 aaPredicted RBP9.28□□□□□ -0.92
SMG6-218ENST00000575454 RTN2O75298 545 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 CSO75390 466 aaKnown RBP9.28□□□□□ -0.92
SMG6-218ENST00000575454 APOEP02649 317 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 PAEPP09466 180 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 PRR29P0C7W0 189 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 THEGLP0DJG4 465 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 EPB41P11171 864 aaKnown RBP9.28□□□□□ -0.92
SMG6-218ENST00000575454 TBXAS1P24557 533 aaPredicted RBP9.28□□□□□ -0.92
SMG6-218ENST00000575454 AKT2P31751 481 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 DRD3P35462 400 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 CSRP3P50461 194 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 LY6DQ14210 128 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 EDRF1Q3B7T1 1238 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 FSCBQ5H9T9 825 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 TTC39BQ5VTQ0 682 aaPredicted RBP9.28□□□□□ -0.92
SMG6-218ENST00000575454 NADSYN1Q6IA69 706 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 INO80CQ6PI98 192 aaPredicted RBP9.28□□□□□ -0.92
SMG6-218ENST00000575454 MMS22LQ6ZRQ5 1243 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 BEND5Q7L4P6 421 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 TMC6Q7Z403 805 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 DCP2Q8IU60 420 aaKnown RBP9.28□□□□□ -0.92
SMG6-218ENST00000575454 GUF1Q8N442 669 aaKnown RBP9.28□□□□□ -0.92
SMG6-218ENST00000575454 MAPK15Q8TD08 544 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 SLC35F5Q8WV83 523 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 VCPIP1Q96JH7 1222 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 BTN2A3PQ96KV6 586 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 RPL10LQ96L21 214 aaKnown RBP9.28□□□□□ -0.92
SMG6-218ENST00000575454 FCRL2Q96LA5 508 aaPredicted RBP9.28□□□□□ -0.92
SMG6-218ENST00000575454 NUCKS1Q9H1E3 243 aaKnown RBP9.28□□□□□ -0.92
SMG6-218ENST00000575454 PPM1HQ9ULR3 514 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 SSUH2Q9Y2M2 353 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 FARP1Q9Y4F1 1045 aaPredicted RBP9.28□□□□□ -0.92
SMG6-218ENST00000575454 PCDHGA8Q9Y5G5 932 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 HEMK1Q9Y5R4 338 aaPredicted RBP9.28□□□□□ -0.92
SMG6-218ENST00000575454 SPTAN1Q13813 2472 aaKnown RBP9.27□□□□□ -0.93
SMG6-218ENST00000575454 ADAMTS9Q9P2N4 1935 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 MCF2LO15068 1137 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 FFAR2O15552 330 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 PIAS2O75928 621 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 RHOBTB3O94955 611 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 PLK1P53350 603 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 HNRNPKP61978 463 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMG6-218ENST00000575454 CNTN1Q12860 1018 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 MTA1Q13330 715 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 CNGA2Q16280 664 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 ISXQ2M1V0 245 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 RABGAP1LQ5R372 815 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 AGBL4Q5VU57 503 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 PMF1Q6P1K2 205 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 CCDC81Q6ZN84 652 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 APCDD1Q8J025 514 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 LGI2Q8N0V4 545 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 CFAP52Q8N1V2 620 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 ARL14Q8N4G2 192 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 TMEM145Q8NBT3 493 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 DQX1Q8TE96 717 aaKnown RBP9.27□□□□□ -0.93
SMG6-218ENST00000575454 FRS2Q8WU20 508 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 ERCC4Q92889 916 aaPredicted RBP9.27□□□□□ -0.93
SMG6-218ENST00000575454 RNF34Q969K3 372 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 SLC39A13Q96H72 371 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 CCDC114Q96M63 670 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 SLC46A1Q96NT5 459 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 FAM117AQ9C073 453 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 SEMA4CQ9C0C4 833 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 ASCL3Q9NQ33 180 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 COQ4Q9Y3A0 265 aa9.27□□□□□ -0.93
SMG6-218ENST00000575454 ANKRD17O75179 2603 aaKnown RBP9.26□□□□□ -0.93
SMG6-218ENST00000575454 LRRK2Q5S007 2527 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 F5H5T6 163 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 H3BM21 787 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 SLC16A3O15427 465 aaKnown RBP9.26□□□□□ -0.93
SMG6-218ENST00000575454 SLC31A1O15431 190 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 ATP9BO43861 1147 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 TCEA3O75764 348 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 MOCS2O96007 188 aaPredicted RBP9.26□□□□□ -0.93
SMG6-218ENST00000575454 SLC2A3P11169 496 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 TACR2P21452 398 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 HNRNPA2B1P22626 353 aaKnown RBP9.26□□□□□ -0.93
SMG6-218ENST00000575454 CMA1P23946 247 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 ACADSBP45954 432 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 RGS7P49802 495 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 STK19P49842 368 aaPredicted RBP9.26□□□□□ -0.93
SMG6-218ENST00000575454 INHBCP55103 352 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 ACCSLQ4AC99 568 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 PRICKLE2Q7Z3G6 844 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 HORMAD1Q86X24 394 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 CHSY1Q86X52 802 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 LURAP1LQ8IV03 231 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 ATP6V0D2Q8N8Y2 350 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 WDR48Q8TAF3 677 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 IFI44Q8TCB0 444 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 FAM149B1Q96BN6 582 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 MYEOVQ96EZ4 313 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 EEF2KMTQ96G04 330 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 CCDC34Q96HJ3 373 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 APOLD1Q96LR9 279 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 CALN1Q9BXU9 219 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 OSBPL2Q9H1P3 480 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 DYRK4Q9NR20 520 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms