RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 PIGVQ9NUD9 493 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 ANO10Q9NW15 660 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 TMEM51Q9NW97 253 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 FBXL12Q9NXK8 326 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 SLCO3A1Q9UIG8 710 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 A0A1W2PP55 124 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 FAM47DPA6NHR8 397 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 GOLGA8SH3BPF8 625 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 MID1O15344 667 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 RNASEH2AO75792 299 aaKnown RBP12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 GFPT2O94808 682 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 ADH1BP00325 375 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 MMEP08473 750 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 CD59P13987 128 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 CXCR3P49682 368 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 IRAK1P51617 712 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 PLK1P53350 603 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 POLR2FP61218 127 aaKnown RBP12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 NOMO3P69849 1222 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 SIM1P81133 766 aaPredicted RBP12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 MYL5Q02045 173 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 DEUP1Q05D60 604 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 HNRNPDQ14103 355 aaKnown RBP12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 SLC25A52Q3SY17 297 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 C2CD6Q53TS8 623 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 NAA35Q5VZE5 725 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 ZNF677Q86XU0 584 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 STK40Q8N2I9 435 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 CPA5Q8WXQ8 436 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 BIRC7Q96CA5 298 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 PGAP3Q96FM1 320 aaPredicted RBP12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 SPAG5Q96R06 1193 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 TBCBQ99426 244 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 MUC3BQ9H195 1237 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 FANCLQ9NW38 375 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 ARHGEF38Q9NXL2 777 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 SLC25A13Q9UJS0 675 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 VPS28Q9UK41 221 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 FZD4Q9ULV1 537 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 DAAM1Q9Y4D1 1078 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 PCDH15Q96QU1 1955 aa12.72□□□□□ -0.37
CTDNEP1-205ENST00000570828 SPAARA0A1B0GVQ0 90 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 A0A1B0GVT2 93 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 LRRC72A6NJI9 287 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 GJB3O75712 270 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 ADCY5O95622 1261 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 MBD3O95983 291 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 IL1BP01584 269 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 TFE3P19532 575 aaPredicted RBP12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 CD27P26842 260 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 SLC8A1P32418 973 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 RDXP35241 583 aaKnown RBP12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 FLT3P36888 993 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 GRIA4P48058 902 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 CSNK1EP49674 416 aaKnown RBP12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 KLK7P49862 253 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 CDH4P55283 916 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 ACBD5Q5T8D3 534 aaPredicted RBP12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 KIAA0895LQ68EN5 471 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 LRRC31Q6UY01 552 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 ADAT2Q7Z6V5 191 aaKnown RBP12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 DSG4Q86SJ6 1040 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 C14orf80Q86SX3 495 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 NAXDQ8IW45 347 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 C1orf216Q8TAB5 229 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 NT5C3BQ969T7 300 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 PCMTD1Q96MG8 357 aaPredicted RBP12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 FEM1AQ9BSK4 669 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 GAREM1Q9H706 876 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 TM9SF3Q9HD45 589 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 OSGEPQ9NPF4 335 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 NLRC4Q9NPP4 1024 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 SERGEFQ9UGK8 458 aa12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 NOCTQ9UK39 431 aaKnown RBP12.71□□□□□ -0.37
CTDNEP1-205ENST00000570828 FRYQ5TBA9 3013 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 CACNA1EQ15878 2313 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 LGALS16A8MUM7 142 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 SH3BP5O60239 455 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 RHOCP08134 193 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 VAV1P15498 845 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 ZNF18P17022 549 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 C5AR1P21730 350 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 SOX5P35711 763 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 COPB1P53618 953 aaKnown RBP12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 KRT83P78385 493 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 CDR2Q01850 454 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 SYCP1Q15431 976 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 ST3GAL2Q16842 350 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 HLA-BQ31612 363 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 C5orf22Q49AR2 442 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 ACCSLQ4AC99 568 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 CCDC183Q5T5S1 534 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 NCEH1Q6PIU2 408 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 TRIM72Q6ZMU5 477 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 NEK11Q8NG66 645 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 OR2T34Q8NGX1 318 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 SLC20A1Q8WUM9 679 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 PTPRN2Q92932 1015 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 CFAP57Q96MR6 1250 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 C2orf49Q9BVC5 232 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms