RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 ATP9BO43861 1147 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 MAFKO60675 156 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 SPAG7O75391 227 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 TCEA3O75764 348 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 MT-CYBP00156 380 aaPredicted RBP7.22□□□□□ -1.25
SMG1-215ENST00000568239 LRG1P02750 347 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 INHBAP08476 426 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 MBL2P11226 248 aaPredicted RBP7.22□□□□□ -1.25
SMG1-215ENST00000568239 RHOQP17081 205 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 TACR2P21452 398 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 CCNCP24863 283 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 GCAP28676 217 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 CORO1AP31146 461 aaKnown RBP7.22□□□□□ -1.25
SMG1-215ENST00000568239 LSP1P33241 339 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 CTNNB1P35222 781 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 SEC24CP53992 1094 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 CDK16Q00536 496 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 RING1Q06587 406 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 GLIPR1L2Q4G1C9 344 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 TMEM240Q5SV17 173 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 PLPP4Q5VZY2 271 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 NADSYN1Q6IA69 706 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 CES3Q6UWW8 571 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 UNC5AQ6ZN44 842 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 PRPF39Q86UA1 669 aaKnown RBP7.22□□□□□ -1.25
SMG1-215ENST00000568239 C4orf33Q8N1A6 199 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 SPATA22Q8NHS9 363 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 BCAS4Q8TDM0 211 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 MYEOVQ96EZ4 313 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 STAMBPL1Q96FJ0 436 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 HMCESQ96FZ2 354 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 KLHL5Q96PQ7 755 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 EBNA1BP2Q99848 306 aaKnown RBP7.22□□□□□ -1.25
SMG1-215ENST00000568239 PAIP2Q9BPZ3 127 aaKnown RBP7.22□□□□□ -1.25
SMG1-215ENST00000568239 GBA3Q9H227 469 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 ACSS3Q9H6R3 686 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 CNOT10Q9H9A5 744 aaKnown RBP7.22□□□□□ -1.25
SMG1-215ENST00000568239 KIF9Q9HAQ2 790 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.22□□□□□ -1.25
SMG1-215ENST00000568239 INTS9Q9NV88 658 aaKnown RBP7.22□□□□□ -1.25
SMG1-215ENST00000568239 SAMD15Q9P1V8 674 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 PTPRSQ13332 1948 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 CCDC78A2IDD5 438 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 CARNS1A5YM72 827 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 SDR42E2A6NKP2 422 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 J3KR12 359 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 MATN3O15232 486 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 ACSL4O60488 711 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 TSPAN3O60637 253 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 RAMP2O60895 175 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 CTSAP10619 480 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 TPH1P17752 444 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 STX2P32856 288 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 ETFBP38117 255 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 MMP13P45452 471 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 RPS24P62847 133 aaKnown RBP7.22□□□□□ -1.25
SMG1-215ENST00000568239 POLD3Q15054 466 aaPredicted RBP7.22□□□□□ -1.25
SMG1-215ENST00000568239 TXNDC8Q6A555 127 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 TIGD7Q6NT04 549 aaPredicted RBP7.22□□□□□ -1.25
SMG1-215ENST00000568239 LRRC8BQ6P9F7 803 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 HERC6Q8IVU3 1022 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 TCEAL8Q8IYN2 117 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 CNTD1Q8N815 330 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 IPMKQ8NFU5 416 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 BHMTQ93088 406 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 PSMG2Q969U7 264 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 SIGLEC10Q96LC7 697 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 ZBP1Q9H171 429 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 TMEM51Q9NW97 253 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 DONSONQ9NYP3 566 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 SLC24A2Q9UI40 661 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 HBS1LQ9Y450 684 aaKnown RBP7.22□□□□□ -1.25
SMG1-215ENST00000568239 COL4A4P53420 1690 aaPredicted RBP7.22□□□□□ -1.25
SMG1-215ENST00000568239 A6NNZ2 444 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 GOLGA8RI6L899 631 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 SPAG6O75602 509 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 ZNF189O75820 626 aaPredicted RBP7.21□□□□□ -1.25
SMG1-215ENST00000568239 AP2A1O95782 977 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 IGLV3-27P01718 113 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 GJA1P17302 382 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 GABRR2P28476 465 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 SLC6A4P31645 630 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 GBP2P32456 591 aaPredicted RBP7.21□□□□□ -1.25
SMG1-215ENST00000568239 ERVFC1P60507 584 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 MAXP61244 160 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 NRG1Q02297 640 aaPredicted RBP7.21□□□□□ -1.25
SMG1-215ENST00000568239 PCSK7Q16549 785 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 TUBB8Q3ZCM7 444 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 IL31Q6EBC2 164 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 TRMT10BQ6PF06 316 aaKnown RBP7.21□□□□□ -1.25
SMG1-215ENST00000568239 PSRC1Q6PGN9 363 aaPredicted RBP7.21□□□□□ -1.25
SMG1-215ENST00000568239 ITIH5Q86UX2 942 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 NLRP14Q86W24 1093 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 RIBC1Q8N443 379 aaPredicted RBP7.21□□□□□ -1.25
SMG1-215ENST00000568239 ARL14EPQ8N8R7 260 aaPredicted RBP7.21□□□□□ -1.25
SMG1-215ENST00000568239 NSMCE1Q8WV22 266 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 OVCA2Q8WZ82 227 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 LRRC39Q96DD0 335 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 MYRFLQ96LU7 910 aa7.21□□□□□ -1.25
SMG1-215ENST00000568239 CEP295NLQ96MC4 621 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms