RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.85□□□□□ -1.79
PALB2-204ENST00000566069 EXD3Q8N9H8 876 aa3.85□□□□□ -1.79
PALB2-204ENST00000566069 FSIP1Q8NA03 581 aa3.85□□□□□ -1.79
PALB2-204ENST00000566069 CSGALNACT1Q8TDX6 532 aa3.85□□□□□ -1.79
PALB2-204ENST00000566069 AFG1LQ8WV93 481 aa3.85□□□□□ -1.79
PALB2-204ENST00000566069 ATP2A3Q93084 1043 aa3.85□□□□□ -1.79
PALB2-204ENST00000566069 ARRDC3Q96B67 414 aa3.85□□□□□ -1.79
PALB2-204ENST00000566069 GCC1Q96CN9 775 aa3.85□□□□□ -1.79
PALB2-204ENST00000566069 KTI12Q96EK9 354 aaPredicted RBP3.85□□□□□ -1.79
PALB2-204ENST00000566069 ZNF347Q96SE7 839 aa3.85□□□□□ -1.79
PALB2-204ENST00000566069 OSBPL5Q9H0X9 879 aaPredicted RBP3.85□□□□□ -1.79
PALB2-204ENST00000566069 ITM2CQ9NQX7 267 aa3.85□□□□□ -1.79
PALB2-204ENST00000566069 RASSF1Q9NS23 344 aa3.85□□□□□ -1.79
PALB2-204ENST00000566069 RCE1Q9Y256 329 aa3.85□□□□□ -1.79
PALB2-204ENST00000566069 B4DGG1 531 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 MCIDASD6RGH6 385 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 GRM8O00222 908 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 FGF2P09038 288 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 HSD3B1P14060 373 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 KRTAP5-9P26371 169 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 PNPLA4P41247 253 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 CDKN2AP42771 156 aaKnown RBP3.84□□□□□ -1.79
PALB2-204ENST00000566069 ME1P48163 572 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 ADPRHP54922 357 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 ID2Q02363 134 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 PDCLQ13371 301 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 EARS2Q5JPH6 523 aaKnown RBP3.84□□□□□ -1.79
PALB2-204ENST00000566069 LIPMQ5VYY2 423 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 ZNF549Q6P9A3 640 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 KIAA1324Q6UXG2 1013 aaKnown RBP3.84□□□□□ -1.79
PALB2-204ENST00000566069 RTL10Q7L3V2 364 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 MDGA2Q7Z553 956 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 C2CD5Q86YS7 1000 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 HERC6Q8IVU3 1022 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 DCP1BQ8IZD4 617 aaKnown RBP3.84□□□□□ -1.79
PALB2-204ENST00000566069 MYRIPQ8NFW9 859 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 RILPL2Q969X0 211 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 THOC3Q96J01 351 aaKnown RBP3.84□□□□□ -1.79
PALB2-204ENST00000566069 FAM234AQ9H0X4 552 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 SLCO5A1Q9H2Y9 848 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 MOV10Q9HCE1 1003 aaKnown RBP3.84□□□□□ -1.79
PALB2-204ENST00000566069 TXNRD2Q9NNW7 524 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 SLC22A11Q9NSA0 550 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 LUZP4Q9P127 313 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 IPO11Q9UI26 975 aaKnown RBP3.84□□□□□ -1.79
PALB2-204ENST00000566069 ICKQ9UPZ9 632 aa3.84□□□□□ -1.79
PALB2-204ENST00000566069 ZNF335Q9H4Z2 1342 aaPredicted RBP3.84□□□□□ -1.79
PALB2-204ENST00000566069 LMTK3Q96Q04 1460 aa3.84□□□□□ -1.8
PALB2-204ENST00000566069 NOTCH3Q9UM47 2321 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 SAC3D1A6NKF1 404 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 F8W810 466 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 SLC28A2O43868 658 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 CTSAP10619 480 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 TNFRSF1BP20333 461 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 PRPH2P23942 346 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 CDK18Q07002 472 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 BIRC3Q13489 604 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 STIM1Q13586 685 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 TMEM95Q3KNT9 176 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 ZNF585BQ52M93 769 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 LRIG3Q6UXM1 1119 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 SYNE3Q6ZMZ3 975 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 COLCA1Q6ZS62 124 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 FAM57BQ71RH2 274 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 PIM3Q86V86 326 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 ADHFE1Q8IWW8 467 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 CPXCR1Q8N123 301 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 TMEM57Q8N5G2 664 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 ARL14EPQ8N8R7 260 aaPredicted RBP3.83□□□□□ -1.8
PALB2-204ENST00000566069 WIPF2Q8TF74 440 aaPredicted RBP3.83□□□□□ -1.8
PALB2-204ENST00000566069 ZFYVE19Q96K21 471 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 ZSCAN31Q96LW9 406 aaPredicted RBP3.83□□□□□ -1.8
PALB2-204ENST00000566069 PYM1Q9BRP8 204 aaKnown RBP3.83□□□□□ -1.8
PALB2-204ENST00000566069 ARHGAP39Q9C0H5 1083 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 CHODLQ9H9P2 273 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 PLEKHA2Q9HB19 425 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 PAPOLBQ9NRJ5 636 aaKnown RBP3.83□□□□□ -1.8
PALB2-204ENST00000566069 ZBTB40Q9NUA8 1239 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 SLC8A2Q9UPR5 921 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 DERAQ9Y315 318 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 PKP3Q9Y446 797 aa3.83□□□□□ -1.8
PALB2-204ENST00000566069 EME2A4GXA9 379 aaPredicted RBP3.82□□□□□ -1.8
PALB2-204ENST00000566069 NPIPB13A6NJU9 1138 aa3.82□□□□□ -1.8
PALB2-204ENST00000566069 NPIPB5A8MRT5 1133 aa3.82□□□□□ -1.8
PALB2-204ENST00000566069 KCNJ18B7U540 433 aa3.82□□□□□ -1.8
PALB2-204ENST00000566069 NPIPB4C9JG80 1138 aa3.82□□□□□ -1.8
PALB2-204ENST00000566069 CNPP09543 421 aaKnown RBP3.82□□□□□ -1.8
PALB2-204ENST00000566069 CSF1P09603 554 aa3.82□□□□□ -1.8
PALB2-204ENST00000566069 ACP5P13686 325 aa3.82□□□□□ -1.8
PALB2-204ENST00000566069 CHN1P15882 459 aa3.82□□□□□ -1.8
PALB2-204ENST00000566069 STAT1P42224 750 aa3.82□□□□□ -1.8
PALB2-204ENST00000566069 CPA2P48052 419 aa3.82□□□□□ -1.8
PALB2-204ENST00000566069 PPM1FP49593 454 aaPredicted RBP3.82□□□□□ -1.8
PALB2-204ENST00000566069 OAZ1P54368 228 aa3.82□□□□□ -1.8
PALB2-204ENST00000566069 ALKBH1Q13686 389 aaKnown RBP3.82□□□□□ -1.8
PALB2-204ENST00000566069 THOC5Q13769 683 aaKnown RBP3.82□□□□□ -1.8
PALB2-204ENST00000566069 PGM5Q15124 567 aa3.82□□□□□ -1.8
PALB2-204ENST00000566069 GXYLT1Q4G148 440 aa3.82□□□□□ -1.8
PALB2-204ENST00000566069 CTXN3Q4LDR2 81 aa3.82□□□□□ -1.8
PALB2-204ENST00000566069 ZNF484Q5JVG2 852 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms