RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 H0Y626 953 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 DCLK1O15075 740 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 TRIM24O15164 1050 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 DCXO43602 365 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 TIMM44O43615 452 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 RHOXF2BP0C7M4 288 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 AMPD1P23109 780 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 OR1E1P30953 314 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 ARL4AP40617 200 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 PAFAH1B1P43034 410 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 YBEYP58557 167 aaPredicted RBP12.95□□□□□ -0.34
SF3B3-206ENST00000565990 TPI1P60174 286 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 SIGLEC14Q08ET2 396 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 MMRN1Q13201 1228 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 FZD5Q13467 585 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 RPS6KA1Q15418 735 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 TMEM196Q5HYL7 178 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 C6orf118Q5T5N4 469 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 RWDD4Q6NW29 188 aaKnown RBP12.95□□□□□ -0.34
SF3B3-206ENST00000565990 MFSD7Q6UXD7 560 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 ZNF852Q6ZMS4 543 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 LEKR1Q6ZMV7 388 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 CIR1Q86X95 450 aaPredicted RBP12.95□□□□□ -0.34
SF3B3-206ENST00000565990 CARNMT1Q8N4J0 409 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 PQLC3Q8N755 202 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 UBL4BQ8N7F7 174 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 NOA1Q8NC60 698 aaKnown RBP12.95□□□□□ -0.34
SF3B3-206ENST00000565990 OR52K2Q8NGK3 314 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 WFDC5Q8TCV5 224 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 COG1Q8WTW3 980 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 BHMTQ93088 406 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 TTC17Q96AE7 1141 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 RNF25Q96BH1 459 aaPredicted RBP12.95□□□□□ -0.34
SF3B3-206ENST00000565990 SHDQ96IW2 340 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 RNF157Q96PX1 679 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 RHOXF2Q9BQY4 288 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 FEM1AQ9BSK4 669 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 NOL6Q9H6R4 1146 aaKnown RBP12.95□□□□□ -0.34
SF3B3-206ENST00000565990 ARHGEF4Q9NR80 690 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 ARHGEF3Q9NR81 526 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 PACSIN2Q9UNF0 486 aaPredicted RBP12.95□□□□□ -0.34
SF3B3-206ENST00000565990 K7EQS6 105 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 KAT7O95251 611 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 PYGMP11217 842 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 DRD1P21728 446 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 CD70P32970 193 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 PTPN7P35236 360 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 ACTN2P35609 894 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 GRIA2P42262 883 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 TNFRSF4P43489 277 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 NDST2P52849 883 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 MESP2Q0VG99 397 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 LMAN2Q12907 356 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 DMC1Q14565 340 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 PAFAH1B3Q15102 231 aaKnown RBP12.94□□□□□ -0.34
SF3B3-206ENST00000565990 PPP2R5EQ16537 467 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 TMEM215Q68D42 235 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 NAIF1Q69YI7 327 aaPredicted RBP12.94□□□□□ -0.34
SF3B3-206ENST00000565990 SLC9A4Q6AI14 798 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 FSTL4Q6MZW2 842 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 EMBQ6PCB8 327 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 CCNI2Q6ZMN8 369 aaPredicted RBP12.94□□□□□ -0.34
SF3B3-206ENST00000565990 SPOCD1Q6ZMY3 1216 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 TPRG1Q6ZUI0 275 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 ADIPOR2Q86V24 386 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 MFN1Q8IWA4 741 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 CCDC117Q8IWD4 279 aaPredicted RBP12.94□□□□□ -0.34
SF3B3-206ENST00000565990 LZTR1Q8N653 840 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 KCNV2Q8TDN2 545 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 EZH1Q92800 747 aaPredicted RBP12.94□□□□□ -0.34
SF3B3-206ENST00000565990 CALN1Q9BXU9 219 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 ACE2Q9BYF1 805 aaPredicted RBP12.94□□□□□ -0.34
SF3B3-206ENST00000565990 OSBPL6Q9BZF3 934 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 MAGEH1Q9H213 219 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 EPC1Q9H2F5 836 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 LRRC19Q9H756 370 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 DNAJC17Q9NVM6 304 aaKnown RBP12.94□□□□□ -0.34
SF3B3-206ENST00000565990 KLHL11Q9NVR0 708 aa12.94□□□□□ -0.34
SF3B3-206ENST00000565990 INTS6Q9UL03 887 aaKnown RBP12.94□□□□□ -0.34
SF3B3-206ENST00000565990 KANSL1LA0AUZ9 987 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 H3BQF6 201 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 POLR3GO15318 223 aaPredicted RBP12.93□□□□□ -0.34
SF3B3-206ENST00000565990 DAPK3O43293 454 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 KRT1P04264 644 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 CHRM1P11229 460 aaPredicted RBP12.93□□□□□ -0.34
SF3B3-206ENST00000565990 CHRNB1P11230 501 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 GJC1P36383 396 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 VASPP50552 380 aaPredicted RBP12.93□□□□□ -0.34
SF3B3-206ENST00000565990 GNA12Q03113 381 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 CDH18Q13634 790 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 CCINQ13939 588 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 PON2Q15165 354 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 GEN1Q17RS7 908 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 TFDP3Q5H9I0 405 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 DCAF12L1Q5VU92 463 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 GRAMD4Q6IC98 578 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 TRIM67Q6ZTA4 783 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 TFAP2DQ7Z6R9 452 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 CREG2Q8IUH2 290 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 ARHGAP12Q8IWW6 846 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms