RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 KLHL40Q2TBA0 621 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 INAVAQ3KP66 663 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 SLC45A4Q5BKX6 768 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 C9orf64Q5T6V5 341 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 OTUD1Q5VV17 481 aaPredicted RBP17.19■□□□□ 0.34
USB1-211ENST00000565662 PSAPL1Q6NUJ1 521 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 RETSATQ6NUM9 610 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 MMS22LQ6ZRQ5 1243 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 ZSCAN30Q86W11 494 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 DHX40Q8IX18 779 aaKnown RBP17.19■□□□□ 0.34
USB1-211ENST00000565662 ZNF366Q8N895 744 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 NTAN1Q96AB6 310 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 TMEM63CQ9P1W3 806 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 DOCK4Q8N1I0 1966 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 E9PAM4 449 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 YKT6O15498 198 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 ADCY5O95622 1261 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 GOT1P17174 413 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 KCNA4P22459 653 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 MZF1P28698 734 aaPredicted RBP17.18■□□□□ 0.34
USB1-211ENST00000565662 OR1E1P30953 314 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 HTR7P34969 479 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 RECQLP46063 649 aaPredicted RBP17.18■□□□□ 0.34
USB1-211ENST00000565662 MAPKAPK2P49137 400 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 CCR5P51681 352 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 GRIK2Q13002 908 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 SEMA3BQ13214 749 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 SUZ12Q15022 739 aaKnown RBP17.18■□□□□ 0.34
USB1-211ENST00000565662 UAP1L1Q3KQV9 507 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 SH3PXD2AQ5TCZ1 1133 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 CAVIN1Q6NZI2 390 aaKnown RBP17.18■□□□□ 0.34
USB1-211ENST00000565662 CACUL1Q86Y37 369 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 APCDD1Q8J025 514 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 ZCCHC9Q8N567 271 aaKnown RBP17.18■□□□□ 0.34
USB1-211ENST00000565662 SH2D3CQ8N5H7 860 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 SLC20A1Q8WUM9 679 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 SNX19Q92543 992 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 IGSF8Q969P0 613 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 MYEOVQ96EZ4 313 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 PPP1R16AQ96I34 528 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 CFAP57Q96MR6 1250 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 NCAPGQ9BPX3 1015 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 C11orf70Q9BRQ4 267 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 CEP44Q9C0F1 390 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 MIR1-1HGQ9H1L0 117 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 OSBPL2Q9H1P3 480 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 SEPT11Q9NVA2 429 aaKnown RBP17.18■□□□□ 0.34
USB1-211ENST00000565662 PCDHGB2Q9Y5G2 931 aa17.18■□□□□ 0.34
USB1-211ENST00000565662 CNOT1A5YKK6 2376 aaKnown RBP17.18■□□□□ 0.34
USB1-211ENST00000565662 C2CD4BA6NLJ0 364 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 TTC34A8MYJ7 566 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 EIF3CLB5ME19 914 aaKnown RBP17.17■□□□□ 0.34
USB1-211ENST00000565662 MAGEC1O60732 1142 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 RNASEH2AO75792 299 aaKnown RBP17.17■□□□□ 0.34
USB1-211ENST00000565662 SLC8A1P32418 973 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 ACSL1P33121 698 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 RACK1P63244 317 aaKnown RBP17.17■□□□□ 0.34
USB1-211ENST00000565662 ACCSLQ4AC99 568 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 KIAA0895LQ68EN5 471 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 DNAJC24Q6P3W2 148 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 FAM124AQ86V42 546 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 MMAAQ8IVH4 418 aaKnown RBP17.17■□□□□ 0.34
USB1-211ENST00000565662 DEFB119Q8N690 84 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 PTPRN2Q92932 1015 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 ERLEC1Q96DZ1 483 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 TRIM11Q96F44 468 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 EIF3CQ99613 913 aaKnown RBP17.17■□□□□ 0.34
USB1-211ENST00000565662 AGPAT1Q99943 283 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 CD93Q9NPY3 652 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 RTN4Q9NQC3 1192 aaKnown RBP17.17■□□□□ 0.34
USB1-211ENST00000565662 DYRK4Q9NR20 520 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 EIF2B4Q9UI10 523 aaKnown RBP17.17■□□□□ 0.34
USB1-211ENST00000565662 GON4LQ3T8J9 2241 aa17.17■□□□□ 0.34
USB1-211ENST00000565662 ZSCAN5CA6NGD5 496 aaPredicted RBP17.16■□□□□ 0.34
USB1-211ENST00000565662 SIGLEC16A6NMB1 481 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 MCF2LO15068 1137 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 EPHB6O15197 1021 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 MID1O15344 667 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 IL1BP01584 269 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 PRNPP04156 253 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 GPD1P21695 349 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 PMLP29590 882 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 KLK7P49862 253 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 ZNF252P-AS1Q0IIN9 211 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 SCAPQ12770 1279 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 FIGNQ5HY92 759 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 MON1BQ7L1V2 547 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 APTXQ7Z2E3 356 aaKnown RBP17.16■□□□□ 0.34
USB1-211ENST00000565662 ADAT2Q7Z6V5 191 aaKnown RBP17.16■□□□□ 0.34
USB1-211ENST00000565662 CIR1Q86X95 450 aaPredicted RBP17.16■□□□□ 0.34
USB1-211ENST00000565662 FAM131BQ86XD5 332 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 OXR1Q8N573 874 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 FRS2Q8WU20 508 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 RXFP2Q8WXD0 754 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 CENPIQ92674 756 aaPredicted RBP17.16■□□□□ 0.34
USB1-211ENST00000565662 ALG14Q96F25 216 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 RPL10LQ96L21 214 aaKnown RBP17.16■□□□□ 0.34
USB1-211ENST00000565662 HPCAL4Q9UM19 191 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 OR51B4Q9Y5P0 310 aa17.16■□□□□ 0.34
USB1-211ENST00000565662 A0A1W2PP55 124 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms