RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 ADCY2Q08462 1091 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 NR1H3Q13133 447 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 RUNX3Q13761 415 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 ALFQ53S48 1182 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 TTC8Q8TAM2 541 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 HERPUD2Q9BSE4 406 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 AP1M1Q9BXS5 423 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 EBF3Q9H4W6 596 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 SPHK2Q9NRA0 654 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 ETNK2Q9NVF9 386 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 SPATA6Q9NWH7 488 aaPredicted RBP17.39■□□□□ 0.37
CMTM3-208ENST00000564247 SMARCAL1Q9NZC9 954 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 RAD54BQ9Y620 910 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 TCRBV7S2A1N4TA0A589 114 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 CTAGE15A4D2H0 777 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 H0Y626 953 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 CCDC188H7C350 402 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 GFRA2O00451 464 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 ADH1CP00326 375 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 CTAGE8P0CG41 777 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 OXCT1P55809 520 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 CCNG2Q16589 344 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 ANO4Q32M45 955 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 C6orf118Q5T5N4 469 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 NCBP2-AS2Q69YL0 99 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 TRIM68Q6AZZ1 485 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 TXNDC11Q6PKC3 985 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 TFAP2DQ7Z6R9 452 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 CTAGE6Q86UF2 777 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 NLRP14Q86W24 1093 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 TMEM25Q86YD3 366 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 CTAGE4Q8IX94 777 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 CARNMT1Q8N4J0 409 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 ZNF557Q8N988 423 aaPredicted RBP17.38■□□□□ 0.37
CMTM3-208ENST00000564247 ATP2A3Q93084 1043 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 HAUS1Q96CS2 278 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 MYEOVQ96EZ4 313 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 PRICKLE1Q96MT3 831 aaPredicted RBP17.38■□□□□ 0.37
CMTM3-208ENST00000564247 IER2Q9BTL4 223 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 BBS2Q9BXC9 721 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 CHRDQ9H2X0 955 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 L2HGDHQ9H9P8 463 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 LMAN1LQ9HAT1 526 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 NUP205Q92621 2012 aa17.38■□□□□ 0.37
CMTM3-208ENST00000564247 FANCMQ8IYD8 2048 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 PROB1E7EW31 1015 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 PDE2AO00408 941 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-208ENST00000564247 MCF2LO15068 1137 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 CHRNB1P11230 501 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 ARSAP15289 507 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 MX2P20592 715 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 NDST2P52849 883 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 YBEYP58557 167 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-208ENST00000564247 OTUD4Q01804 1114 aaKnown RBP17.37■□□□□ 0.37
CMTM3-208ENST00000564247 GAD2Q05329 585 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 PDK1Q15118 436 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 DHCR24Q15392 516 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 EML3Q32P44 896 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 LY6G5CQ5SRR4 150 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 RHBDF2Q6PJF5 856 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 NPNTQ6UXI9 565 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 MAMSTRQ6ZN01 415 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 CIR1Q86X95 450 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-208ENST00000564247 MAML2Q8IZL2 1156 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-208ENST00000564247 UMODL1-AS1Q8N2C9 162 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 CPA6Q8N4T0 437 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 SPATA4Q8NEY3 305 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 ACTL9Q8TC94 416 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 C1orf54Q8WWF1 131 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 MAGOHBQ96A72 148 aaKnown RBP17.37■□□□□ 0.37
CMTM3-208ENST00000564247 FEZ2Q9UHY8 353 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-208ENST00000564247 FBXO4Q9UKT5 387 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 NEU3Q9UQ49 428 aa17.37■□□□□ 0.37
CMTM3-208ENST00000564247 OTOL1A6NHN0 477 aaPredicted RBP17.36■□□□□ 0.37
CMTM3-208ENST00000564247 NEDD8-MDP1E9PL57 170 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 LAMTOR5O43504 91 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 RAMP2O60895 175 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 LUC7L3O95232 432 aaKnown RBP17.36■□□□□ 0.37
CMTM3-208ENST00000564247 RHOCP08134 193 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 IRAK1P51617 712 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 SGSHP51688 502 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 EIF3EP60228 445 aaKnown RBP17.36■□□□□ 0.37
CMTM3-208ENST00000564247 GBE1Q04446 702 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 MTAPQ13126 283 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 XRCC4Q13426 336 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 CDH18Q13634 790 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 LRRC32Q14392 662 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 POLD3Q15054 466 aaPredicted RBP17.36■□□□□ 0.37
CMTM3-208ENST00000564247 ZNF528Q3MIS6 628 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 DGKKQ5KSL6 1271 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 ARTNQ5T4W7 220 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 ZNF572Q7Z3I7 529 aaPredicted RBP17.36■□□□□ 0.37
CMTM3-208ENST00000564247 SETD3Q86TU7 594 aaPredicted RBP17.36■□□□□ 0.37
CMTM3-208ENST00000564247 ALYREFQ86V81 257 aaKnown RBP17.36■□□□□ 0.37
CMTM3-208ENST00000564247 LRRC49Q8IUZ0 686 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 MFN1Q8IWA4 741 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 PRELID2Q8N945 189 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 BHMTQ93088 406 aa17.36■□□□□ 0.37
CMTM3-208ENST00000564247 XPO6Q96QU8 1125 aaKnown RBP17.36■□□□□ 0.37
CMTM3-208ENST00000564247 FERMT1Q9BQL6 677 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms