RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 ADPRHP54922 357 aa17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 CENPCQ03188 943 aa17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 NME3Q13232 169 aa17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 ZNF177Q13360 481 aaPredicted RBP17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 ARCQ7LC44 396 aa17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 BNIPLQ7Z465 357 aa17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 DSG4Q86SJ6 1040 aa17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 C14orf80Q86SX3 495 aa17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 RHBDD1Q8TEB9 315 aa17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 C1orf74Q96LT6 269 aa17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 NUP62CLQ9H1M0 184 aa17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 PLCB1Q9NQ66 1216 aa17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 TOR4AQ9NXH8 423 aa17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 COX16Q9P0S2 106 aa17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 STAP1Q9ULZ2 295 aa17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 FHOD1Q9Y613 1164 aa17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 ZZEF1O43149 2961 aa17.71■□□□□ 0.43
VPS9D1-203ENST00000563798 NYNRINQ9P2P1 1898 aaKnown RBP17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 DRGXA6NNA5 263 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 H0Y8X5 98 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 I6L893 689 aaPredicted RBP17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 LSM8O95777 96 aaKnown RBP17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 UCHL3P15374 230 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 VAV1P15498 845 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 DRD3P35462 400 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 PSMD8P48556 350 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 SLC25A52Q3SY17 297 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 TCP11X2Q5H9J9 407 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 XYLT1Q86Y38 959 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 SKA1Q96BD8 255 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 C18orf8Q96DM3 657 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 ACE2Q9BYF1 805 aaPredicted RBP17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 STK33Q9BYT3 514 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 WDCPQ9H6R7 721 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 ANLNQ9NQW6 1124 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 SAMSN1Q9NSI8 373 aaKnown RBP17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 SLC25A13Q9UJS0 675 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 PPM1HQ9ULR3 514 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 HS3ST2Q9Y278 367 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 PAXBP1Q9Y5B6 917 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 KNL1Q8NG31 2342 aa17.7■□□□□ 0.42
VPS9D1-203ENST00000563798 IGLV3-10A0A075B6K4 115 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 A0A1B0GTQ1 180 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 A0A1W2PR77 199 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 FAM47DPA6NHR8 397 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 MCF2LO15068 1137 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 ADCY5O95622 1261 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 IL1BP01584 269 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 TFE3P19532 575 aaPredicted RBP17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 NUDT1P36639 197 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 GRK6P43250 576 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 RAPGEF1Q13905 1077 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 ARTNQ5T4W7 220 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 FAM46CQ5VWP2 391 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 LAYNQ6UX15 382 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 CCNI2Q6ZMN8 369 aaPredicted RBP17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 ADAT2Q7Z6V5 191 aaKnown RBP17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 SETD3Q86TU7 594 aaPredicted RBP17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 ERICH1Q86X53 443 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 SH2D3CQ8N5H7 860 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 PNPLA1Q8N8W4 532 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 ENOX1Q8TC92 643 aaKnown RBP17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 ZCCHC14Q8WYQ9 949 aaKnown RBP17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 OR8D1Q8WZ84 308 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 SLC6A18Q96N87 628 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 TKTL2Q9H0I9 626 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 TMEM59LQ9UK28 342 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 VPS28Q9UK41 221 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 BTBD3Q9Y2F9 522 aa17.69■□□□□ 0.42
VPS9D1-203ENST00000563798 WNT1P04628 370 aa17.68■□□□□ 0.42
VPS9D1-203ENST00000563798 CD38P28907 300 aa17.68■□□□□ 0.42
VPS9D1-203ENST00000563798 SULT1E1P49888 294 aa17.68■□□□□ 0.42
VPS9D1-203ENST00000563798 C21orf59P57076 290 aa17.68■□□□□ 0.42
VPS9D1-203ENST00000563798 DLG2Q15700 870 aa17.68■□□□□ 0.42
VPS9D1-203ENST00000563798 LRSAM1Q6UWE0 723 aa17.68■□□□□ 0.42
VPS9D1-203ENST00000563798 TMPRSS7Q7RTY8 843 aa17.68■□□□□ 0.42
VPS9D1-203ENST00000563798 OR14C36Q8NHC7 312 aa17.68■□□□□ 0.42
VPS9D1-203ENST00000563798 TBCBQ99426 244 aa17.68■□□□□ 0.42
VPS9D1-203ENST00000563798 ELF4Q99607 663 aaPredicted RBP17.68■□□□□ 0.42
VPS9D1-203ENST00000563798 SIK2Q9H0K1 926 aa17.68■□□□□ 0.42
VPS9D1-203ENST00000563798 PDCL3Q9H2J4 239 aa17.68■□□□□ 0.42
VPS9D1-203ENST00000563798 SARDHQ9UL12 918 aa17.68■□□□□ 0.42
VPS9D1-203ENST00000563798 CABIN1Q9Y6J0 2220 aa17.68■□□□□ 0.42
VPS9D1-203ENST00000563798 PLXNA2O75051 1894 aa17.67■□□□□ 0.42
VPS9D1-203ENST00000563798 SRRM3A6NNA2 597 aaPredicted RBP17.67■□□□□ 0.42
VPS9D1-203ENST00000563798 F8VZ95 297 aa17.67■□□□□ 0.42
VPS9D1-203ENST00000563798 KCNK3O14649 394 aa17.67■□□□□ 0.42
VPS9D1-203ENST00000563798 TNFSF14O43557 240 aa17.67■□□□□ 0.42
VPS9D1-203ENST00000563798 PLRG1O43660 514 aaKnown RBP17.67■□□□□ 0.42
VPS9D1-203ENST00000563798 CNTN5O94779 1100 aa17.67■□□□□ 0.42
VPS9D1-203ENST00000563798 ENDOD1O94919 500 aa17.67■□□□□ 0.42
VPS9D1-203ENST00000563798 ATXN1LP0C7T5 689 aaKnown RBP17.67■□□□□ 0.42
VPS9D1-203ENST00000563798 GGCXP38435 758 aa17.67■□□□□ 0.42
VPS9D1-203ENST00000563798 NOMO3P69849 1222 aa17.67■□□□□ 0.42
VPS9D1-203ENST00000563798 KRT83P78385 493 aa17.67■□□□□ 0.42
VPS9D1-203ENST00000563798 DEUP1Q05D60 604 aa17.67■□□□□ 0.42
VPS9D1-203ENST00000563798 ALFQ53S48 1182 aa17.67■□□□□ 0.42
VPS9D1-203ENST00000563798 HSP90AA4PQ58FG1 418 aa17.67■□□□□ 0.42
VPS9D1-203ENST00000563798 FAM102AQ5T9C2 384 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms