RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 GYS1P13807 737 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 KLRC2P26717 231 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 KCNJ4P48050 445 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 PCYT1AP49585 367 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 RCAN1P53805 252 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 CRYZQ08257 329 aaKnown RBP3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 Q0VFX4 171 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 KEAP1Q14145 624 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 NFATC4Q14934 902 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 TRIM60Q495X7 471 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 DCAF12L2Q5VW00 463 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 AAGABQ6PD74 315 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 SLC30A9Q6PML9 568 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 ANKS1BQ7Z6G8 1248 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 PHF21BQ96EK2 531 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 TMEM41AQ96HV5 264 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 TNIP3Q96KP6 325 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 LMLNQ96KR4 655 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 B3GNT4Q9C0J1 378 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 ARNT2Q9HBZ2 717 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 CD93Q9NPY3 652 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 ZNF112Q9UJU3 913 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 FZD10Q9ULW2 581 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 IFITM10A6NMD0 228 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 ACOT8O14734 319 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 HEXIM1O94992 359 aaKnown RBP3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 KRT18P05783 430 aaKnown RBP3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 MYL1P05976 194 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 CHRNB2P17787 502 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 PPM1AP35813 382 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 TECP42680 631 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 PMS2P54278 862 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 TMPRSS3P57727 454 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 DSCR9P59020 149 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 ABATP80404 500 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 SPARCL1Q14515 664 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 FNBP1LQ5T0N5 605 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 NADSYN1Q6IA69 706 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 Q6ZTC4 211 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 IGFN1Q86VF2 1251 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 CAMK1DQ8IU85 385 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 FAM186BQ8IYM0 893 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 LRRC57Q8N9N7 239 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 FAM71BQ8TC56 605 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 HDHD5Q9BXW7 423 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 SEZ6LQ9BYH1 1024 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 ACTR5Q9H9F9 607 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 OBP2BQ9NPH6 170 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 LIN7CQ9NUP9 197 aaKnown RBP3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 GEMIN8Q9NWZ8 242 aaKnown RBP3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 PCDHA10Q9Y5I2 948 aa3.64□□□□□ -1.83
HMGB1P33-201ENST00000563485 CLEC18AA5D8T8 446 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 LGALS16A8MUM7 142 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 PRPH2P23942 346 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 HOXD3P31249 432 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 CYP2J2P51589 502 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 ZP1P60852 638 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 DUSP6Q16828 381 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 DNTTIP2Q5QJE6 756 aaKnown RBP3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 PRAMEF19Q5SWL8 479 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 OTUD1Q5VV17 481 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 XRRA1Q6P2D8 792 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 GGT6Q6P531 493 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 Q6ZSV7 163 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 FAM185AQ8N0U4 392 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 DPP10Q8N608 796 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 ENDOVQ8N8Q3 282 aaKnown RBP3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 CLEC18CQ8NCF0 446 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 ADAMTS14Q8WXS8 1223 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 CCDC136Q96JN2 1154 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 HIPK3Q9H422 1215 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 SEPSECSQ9HD40 501 aaKnown RBP3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 Q9N2J8 555 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 SLC4A4Q9Y6R1 1079 aa3.63□□□□□ -1.83
HMGB1P33-201ENST00000563485 GOLGA6L3A6NEY3 463 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 GRM8O00222 908 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 LIASO43766 372 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 HOXB9P17482 250 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 PDLIM4P50479 330 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 BTKQ06187 659 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 PTK2BQ14289 1009 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 PLK5Q496M5 336 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 HSP90AB2PQ58FF8 381 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 FAM171A1Q5VUB5 890 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 TMEM71Q6P5X7 295 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 FAM83HQ6ZRV2 1179 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 ZNF367Q7RTV3 350 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 RNF144BQ7Z419 303 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 LMO3Q8TAP4 145 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 RSC1A1Q92681 617 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 APOLD1Q96LR9 279 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 NPAS1Q99742 590 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 RTKNQ9BST9 563 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 CATSPERBQ9H7T0 1116 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 PDE11AQ9HCR9 933 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 ARFGAP3Q9NP61 516 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 PLEKHB1Q9UF11 243 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 SLC25A13Q9UJS0 675 aa3.62□□□□□ -1.83
HMGB1P33-201ENST00000563485 NPIPB13A6NJU9 1138 aa3.61□□□□□ -1.83
HMGB1P33-201ENST00000563485 NPIPB5A8MRT5 1133 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms