RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 TFDP3Q5H9I0 405 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 PPP6R3Q5H9R7 873 aaPredicted RBP12.42□□□□□ -0.42
IRF9-211ENST00000560852 PITRM1Q5JRX3 1037 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 TMCO4Q5TGY1 634 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 MBLAC2Q68D91 279 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 RWDD4Q6NW29 188 aaKnown RBP12.42□□□□□ -0.42
IRF9-211ENST00000560852 TRMT11Q7Z4G4 463 aaKnown RBP12.42□□□□□ -0.42
IRF9-211ENST00000560852 METTL3Q86U44 580 aaKnown RBP12.42□□□□□ -0.42
IRF9-211ENST00000560852 ARHGAP12Q8IWW6 846 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 CARNMT1Q8N4J0 409 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 UBL4BQ8N7F7 174 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 UCMAQ8WVF2 138 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 CASKIN2Q8WXE0 1202 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 ALG3Q92685 438 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 MYO19Q96H55 970 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 MRGPRX3Q96LB0 322 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 TSGA13Q96PP4 275 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 PSMB7Q99436 277 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 GABRG3Q99928 467 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 C2orf49Q9BVC5 232 aaPredicted RBP12.42□□□□□ -0.42
IRF9-211ENST00000560852 TLR10Q9BXR5 811 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 CARD9Q9H257 536 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 TMEM245Q9H330 911 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 LMAN1LQ9HAT1 526 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 CD248Q9HCU0 757 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 C11orf16Q9NQ32 467 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 MTF2Q9Y483 593 aaPredicted RBP12.42□□□□□ -0.42
IRF9-211ENST00000560852 HYOU1Q9Y4L1 999 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 TECTAO75443 2155 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 hCG_1818297A0A087WSY0 165 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 A0A0D9SEW6 157 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 KDELR3O43731 214 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 ATP9BO43861 1147 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 RAMP2O60895 175 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 TRIOO75962 3097 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 PRLRP16471 622 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 POLR2EP19388 210 aaKnown RBP12.41□□□□□ -0.42
IRF9-211ENST00000560852 CD72P21854 359 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 AMPD1P23109 780 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 MSNP26038 577 aaKnown RBP12.41□□□□□ -0.42
IRF9-211ENST00000560852 MZF1P28698 734 aaPredicted RBP12.41□□□□□ -0.42
IRF9-211ENST00000560852 CSKP41240 450 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 SSR1P43307 286 aaKnown RBP12.41□□□□□ -0.42
IRF9-211ENST00000560852 NR2C2P49116 596 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 CLCN6P51797 869 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 TFDP2Q14188 446 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 KRT81Q14533 505 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 POLD3Q15054 466 aaPredicted RBP12.41□□□□□ -0.42
IRF9-211ENST00000560852 FUT11Q495W5 492 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 TMCO3Q6UWJ1 677 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 MFSD7Q6UXD7 560 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 SPOCD1Q6ZMY3 1216 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 SYT13Q7L8C5 426 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 CIR1Q86X95 450 aaPredicted RBP12.41□□□□□ -0.42
IRF9-211ENST00000560852 APCDD1Q8J025 514 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 SPEM1Q8N4L4 309 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 FBXL6Q8N531 539 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 PLD5Q8N7P1 536 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 BHMTQ93088 406 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 ISG20Q96AZ6 181 aaKnown RBP12.41□□□□□ -0.42
IRF9-211ENST00000560852 C1QTNF1Q9BXJ1 281 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 BRD8Q9H0E9 1235 aa12.41□□□□□ -0.42
IRF9-211ENST00000560852 LRRD1A4D1F6 860 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 CES2O00748 559 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 DAPK3O43293 454 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 KIF5CO60282 957 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 CD160O95971 181 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 PYGMP11217 842 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 CETN2P41208 172 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 MARCKSL1P49006 195 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 GEMIN4P57678 1058 aaKnown RBP12.4□□□□□ -0.42
IRF9-211ENST00000560852 ECT2LQ008S8 904 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 MMRN1Q13201 1228 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 KLF1Q13351 362 aaPredicted RBP12.4□□□□□ -0.42
IRF9-211ENST00000560852 GAS6Q14393 721 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 RPS6KA1Q15418 735 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 RNF219Q5W0B1 726 aaPredicted RBP12.4□□□□□ -0.42
IRF9-211ENST00000560852 NCBP2-AS2Q69YL0 99 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 RETSATQ6NUM9 610 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 BBS12Q6ZW61 710 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 BZW1Q7L1Q6 419 aaKnown RBP12.4□□□□□ -0.42
IRF9-211ENST00000560852 TFAP2DQ7Z6R9 452 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 NPWQ8N729 165 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 IL17RCQ8NAC3 791 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 PBXIP1Q96AQ6 731 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 ZNF599Q96NL3 588 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 CALN1Q9BXU9 219 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 FOXQ1Q9C009 403 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 CEP44Q9C0F1 390 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 SLC39A8Q9C0K1 460 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 PDFQ9HBH1 243 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 ETNK2Q9NVF9 386 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.4□□□□□ -0.42
IRF9-211ENST00000560852 TTC7AQ9ULT0 858 aaPredicted RBP12.4□□□□□ -0.42
IRF9-211ENST00000560852 PLA2G4CQ9UP65 541 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 TICRRQ7Z2Z1 1910 aa12.4□□□□□ -0.42
IRF9-211ENST00000560852 CCDC163A0A0D9SF12 145 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 TARSL2A2RTX5 802 aaKnown RBP12.39□□□□□ -0.43
IRF9-211ENST00000560852 ARHGAP42A6NI28 874 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 USP27XA6NNY8 438 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms