RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 SLC35F6Q8N357 371 aa12.57□□□□□ -0.4
USP8-209ENST00000560297 PQLC3Q8N755 202 aa12.57□□□□□ -0.4
USP8-209ENST00000560297 OR52K2Q8NGK3 314 aa12.57□□□□□ -0.4
USP8-209ENST00000560297 ARHGEF2Q92974 986 aaKnown RBP12.57□□□□□ -0.4
USP8-209ENST00000560297 ACDQ96AP0 544 aa12.57□□□□□ -0.4
USP8-209ENST00000560297 ALG14Q96F25 216 aa12.57□□□□□ -0.4
USP8-209ENST00000560297 SPON2Q9BUD6 331 aa12.57□□□□□ -0.4
USP8-209ENST00000560297 C2orf49Q9BVC5 232 aaPredicted RBP12.57□□□□□ -0.4
USP8-209ENST00000560297 CARD9Q9H257 536 aa12.57□□□□□ -0.4
USP8-209ENST00000560297 NDFIP2Q9NV92 336 aa12.57□□□□□ -0.4
USP8-209ENST00000560297 INTS6Q9UL03 887 aaKnown RBP12.57□□□□□ -0.4
USP8-209ENST00000560297 NDRG2Q9UN36 371 aaKnown RBP12.57□□□□□ -0.4
USP8-209ENST00000560297 SIT1Q9Y3P8 196 aa12.57□□□□□ -0.4
USP8-209ENST00000560297 RAD54BQ9Y620 910 aa12.57□□□□□ -0.4
USP8-209ENST00000560297 NCOR1O75376 2440 aa12.57□□□□□ -0.4
USP8-209ENST00000560297 hCG_1818297A0A087WSY0 165 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 TMEM221A6NGB7 291 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 RASA4BC9J798 803 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 PRRT4C9JH25 899 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 K7EQS6 105 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 M0R296 226 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 KCNK3O14649 394 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 RASA4O43374 803 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 TJP3O95049 919 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 EGFP01133 1207 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 TUBB4AP04350 444 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 DLDP09622 509 aaKnown RBP12.56□□□□□ -0.4
USP8-209ENST00000560297 CHRNB1P11230 501 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 TARSP26639 723 aaKnown RBP12.56□□□□□ -0.4
USP8-209ENST00000560297 NNMTP40261 264 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 VASPP50552 380 aaPredicted RBP12.56□□□□□ -0.4
USP8-209ENST00000560297 MRPS21P82921 87 aaKnown RBP12.56□□□□□ -0.4
USP8-209ENST00000560297 ECT2LQ008S8 904 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 MESP2Q0VG99 397 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 CCINQ13939 588 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 FUT11Q495W5 492 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 HSF5Q4G112 596 aaPredicted RBP12.56□□□□□ -0.4
USP8-209ENST00000560297 SEL1L2Q5TEA6 688 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 TMEM215Q68D42 235 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 IL31Q6EBC2 164 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 APCDD1Q8J025 514 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 ZNF687Q8N1G0 1237 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 PLD5Q8N7P1 536 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 DCAF4L2Q8NA75 395 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 KDM1BQ8NB78 822 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 COL25A1Q9BXS0 654 aaPredicted RBP12.56□□□□□ -0.4
USP8-209ENST00000560297 ACE2Q9BYF1 805 aaPredicted RBP12.56□□□□□ -0.4
USP8-209ENST00000560297 OSBPL8Q9BZF1 889 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 CIPCQ9C0C6 399 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 KLC2Q9H0B6 622 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 NOL6Q9H6R4 1146 aaKnown RBP12.56□□□□□ -0.4
USP8-209ENST00000560297 LRRC19Q9H756 370 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 LMAN1LQ9HAT1 526 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 ETNK2Q9NVF9 386 aa12.56□□□□□ -0.4
USP8-209ENST00000560297 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.56□□□□□ -0.4
USP8-209ENST00000560297 CTAGE9A4FU28 777 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 ZSCAN5CA6NGD5 496 aaPredicted RBP12.55□□□□□ -0.4
USP8-209ENST00000560297 ENC1O14682 589 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 KDELR3O43731 214 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 CST8O60676 142 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 SRPRAP08240 638 aaKnown RBP12.55□□□□□ -0.4
USP8-209ENST00000560297 KRT10P13645 584 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 HNRNPLP14866 589 aaKnown RBP eCLIP12.55□□□□□ -0.4
USP8-209ENST00000560297 MX2P20592 715 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 TGM2P21980 687 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 MAGEA9P43362 315 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 KIR2DL1P43626 348 aaPredicted RBP12.55□□□□□ -0.4
USP8-209ENST00000560297 PAPOLAP51003 745 aaKnown RBP12.55□□□□□ -0.4
USP8-209ENST00000560297 DNA2P51530 1060 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 CLCN5P51795 746 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 GEMIN4P57678 1058 aaKnown RBP12.55□□□□□ -0.4
USP8-209ENST00000560297 ST8SIA6P61647 398 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 ETF1P62495 437 aaKnown RBP12.55□□□□□ -0.4
USP8-209ENST00000560297 SERINC3Q13530 473 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 KAZNQ674X7 775 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 NCBP2-AS2Q69YL0 99 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 SDE2Q6IQ49 451 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 RETSATQ6NUM9 610 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 BBS12Q6ZW61 710 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 TRMT11Q7Z4G4 463 aaKnown RBP12.55□□□□□ -0.4
USP8-209ENST00000560297 BMP8AQ7Z5Y6 402 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 METTL3Q86U44 580 aaKnown RBP12.55□□□□□ -0.4
USP8-209ENST00000560297 ZNF354CQ86Y25 554 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 C17orf53Q8N3J3 647 aaPredicted RBP12.55□□□□□ -0.4
USP8-209ENST00000560297 FLCNQ8NFG4 579 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 PJA1Q8NG27 643 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 OR7D4Q8NG98 312 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 P3H4Q92791 437 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 CLDN23Q96B33 292 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 HMCESQ96FZ2 354 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 PBKQ96KB5 322 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 SLC39A8Q9C0K1 460 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 BRD8Q9H0E9 1235 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 ATP13A1Q9HD20 1204 aa12.55□□□□□ -0.4
USP8-209ENST00000560297 MTF2Q9Y483 593 aaPredicted RBP12.55□□□□□ -0.4
USP8-209ENST00000560297 A0A0C4DFX4 3053 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 MYOFQ9NZM1 2061 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 CBX4O00257 560 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 DFFAO00273 331 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 ATG13O75143 517 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms