RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 RASA4BC9J798 803 aa20.88■□□□□ 0.93
SNRPA1-205ENST00000558036 ALOX15BO15296 676 aa20.88■□□□□ 0.93
SNRPA1-205ENST00000558036 RASA4O43374 803 aa20.88■□□□□ 0.93
SNRPA1-205ENST00000558036 CCNB1P14635 433 aa20.88■□□□□ 0.93
SNRPA1-205ENST00000558036 CCNCP24863 283 aa20.88■□□□□ 0.93
SNRPA1-205ENST00000558036 MAGEA6P43360 314 aa20.88■□□□□ 0.93
SNRPA1-205ENST00000558036 LMAN1P49257 510 aa20.88■□□□□ 0.93
SNRPA1-205ENST00000558036 ADGRF1Q5T601 910 aa20.88■□□□□ 0.93
SNRPA1-205ENST00000558036 CAND1Q86VP6 1230 aaKnown RBP20.88■□□□□ 0.93
SNRPA1-205ENST00000558036 IGDCC3Q8IVU1 814 aa20.88■□□□□ 0.93
SNRPA1-205ENST00000558036 TSGA13Q96PP4 275 aa20.88■□□□□ 0.93
SNRPA1-205ENST00000558036 SLC46A2Q9BY10 475 aa20.88■□□□□ 0.93
SNRPA1-205ENST00000558036 IPO11Q9UI26 975 aaKnown RBP20.88■□□□□ 0.93
SNRPA1-205ENST00000558036 TNRC18O15417 2968 aaPredicted RBP20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 J3KR12 359 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 OPA1O60313 960 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 GREM1O60565 184 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 CDC25CP30307 473 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 NDST2P52849 883 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 GYS2P54840 703 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 NTHL1P78549 312 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 SPARCL1Q14515 664 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 SKIDA1Q1XH10 827 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 PARP6Q2NL67 630 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 ZNF534Q76KX8 674 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 FBXO36Q8NEA4 188 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 OR52K2Q8NGK3 314 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 GDPD5Q8WTR4 605 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 GCNAQ96QF7 691 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 RSPH14Q9UHP6 348 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 SMAPO00193 183 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 MTSS1O43312 755 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 RAMP2O60895 175 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 NFKB1P19838 968 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 ACVRL1P37023 503 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 FDFT1P37268 417 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 SLCO1A2P46721 670 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 MTA1Q13330 715 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 SLC5A9Q2M3M2 681 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 KRT71Q3SY84 523 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 ACBD5Q5T8D3 534 aaPredicted RBP20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 PPP2R2DQ66LE6 453 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 LEKR1Q6ZMV7 388 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 OTOP3Q7RTS5 596 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 SHKBP1Q8TBC3 707 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 CHMP2BQ9UQN3 213 aa20.87■□□□□ 0.93
SNRPA1-205ENST00000558036 SHROOM3Q8TF72 1996 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 A0A0D9SEW6 157 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 EPOPA6NHQ4 379 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 MATN3O15232 486 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 POLD3Q15054 466 aaPredicted RBP20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 EPS8L3Q8TE67 593 aaKnown RBP20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 BHMTQ93088 406 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 TEKT5Q96M29 485 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 SAMD11Q96NU1 681 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 UBP1Q9NZI7 540 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 IGSF9Q9P2J2 1179 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 OBSL1O75147 1896 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 DOCK6Q96HP0 2047 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 NYNRINQ9P2P1 1898 aaKnown RBP20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 TLDC2A0PJX2 215 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 ARHGAP42A6NI28 874 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 E7ESA3 106 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 RHOP08100 348 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 MYZAPP0CAP1 466 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 ELK3P41970 407 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 TEAD2Q15562 447 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 LONRF1Q17RB8 773 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 C5orf22Q49AR2 442 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 RABGAP1LQ5R372 815 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 CEP128Q6ZU80 1094 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 SH2D3CQ8N5H7 860 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 PYROXD1Q8WU10 500 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 AZIN2Q96A70 460 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 GDF15Q99988 308 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 GBA3Q9H227 469 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 VPS37BQ9H9H4 285 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 VPS18Q9P253 973 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 CFAP97Q9P2B7 532 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 CCL26Q9Y258 94 aa20.86■□□□□ 0.93
SNRPA1-205ENST00000558036 CLUHO75153 1309 aa20.85■□□□□ 0.93
SNRPA1-205ENST00000558036 PDE4DIPQ5VU43 2346 aa20.85■□□□□ 0.93
SNRPA1-205ENST00000558036 TRAV19A0A0A6YYK7 116 aa20.85■□□□□ 0.93
SNRPA1-205ENST00000558036 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.85■□□□□ 0.93
SNRPA1-205ENST00000558036 USP12O75317 370 aa20.85■□□□□ 0.93
SNRPA1-205ENST00000558036 PTPN2P17706 415 aa20.85■□□□□ 0.93
SNRPA1-205ENST00000558036 TPSB2P20231 275 aa20.85■□□□□ 0.93
SNRPA1-205ENST00000558036 SSTR1P30872 391 aa20.85■□□□□ 0.93
SNRPA1-205ENST00000558036 ZNF33AQ06730 810 aa20.85■□□□□ 0.93
SNRPA1-205ENST00000558036 TPSAB1Q15661 275 aa20.85■□□□□ 0.93
SNRPA1-205ENST00000558036 BCCIPQ9P287 314 aaKnown RBP eCLIP20.85■□□□□ 0.93
SNRPA1-205ENST00000558036 TRHDEQ9UKU6 1024 aa20.85■□□□□ 0.93
SNRPA1-205ENST00000558036 DOCK4Q8N1I0 1966 aa20.85■□□□□ 0.93
SNRPA1-205ENST00000558036 MYO18AQ92614 2054 aaKnown RBP20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 EYSQ5T1H1 3165 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 MOSPD3O75425 235 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 PEX11BO96011 259 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 EIF3BP55884 814 aaKnown RBP20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 GPX6P59796 221 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 IFI35P80217 286 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms