RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 TIMM44O43615 452 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 PYGMP11217 842 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 CHRNB1P11230 501 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 KRT10P13645 584 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 ACVRL1P37023 503 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 ETFBP38117 255 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 PLK1P53350 603 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 GNG11P61952 73 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 ZNF211Q13398 564 aaPredicted RBP21.79■■□□□ 1.08
CASC4-204ENST00000557945 CCINQ13939 588 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 EIF4HQ15056 248 aaKnown RBP21.79■■□□□ 1.08
CASC4-204ENST00000557945 FBXO43Q4G163 708 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 TFDP3Q5H9I0 405 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 ZNF687Q8N1G0 1237 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 LZTR1Q8N653 840 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 NPWQ8N729 165 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 PQLC3Q8N755 202 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 NETO2Q8NC67 525 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 ALG14Q96F25 216 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 NOL6Q9H6R4 1146 aaKnown RBP21.79■■□□□ 1.08
CASC4-204ENST00000557945 SIT1Q9Y3P8 196 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 JRKLQ9Y4A0 524 aa21.79■■□□□ 1.08
CASC4-204ENST00000557945 RASA4BC9J798 803 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 DFFAO00273 331 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 ENC1O14682 589 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 APOL1O14791 398 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 RASA4O43374 803 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 RNF40O75150 1001 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 ATP5BP06576 529 aaKnown RBP21.78■■□□□ 1.08
CASC4-204ENST00000557945 SERPINB6P35237 376 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 NDST2P52849 883 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 YBEYP58557 167 aaPredicted RBP21.78■■□□□ 1.08
CASC4-204ENST00000557945 COPS2P61201 443 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 DYNLT1P63172 113 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 TFDP2Q14188 446 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 TAZQ16635 292 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 PARP15Q460N3 678 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 C2orf27AQ580R0 203 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 EMC10Q5UCC4 262 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 NCBP2-AS2Q69YL0 99 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 CYB5D2Q8WUJ1 264 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 ARHGEF2Q92974 986 aaKnown RBP21.78■■□□□ 1.08
CASC4-204ENST00000557945 TTC17Q96AE7 1141 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 PBXIP1Q96AQ6 731 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 HMCESQ96FZ2 354 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 PSMB7Q99436 277 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 C2orf49Q9BVC5 232 aaPredicted RBP21.78■■□□□ 1.08
CASC4-204ENST00000557945 HEMGNQ9BXL5 484 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 TLR10Q9BXR5 811 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 OSBPL6Q9BZF3 934 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 SLC39A8Q9C0K1 460 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 KLC2Q9H0B6 622 aa21.78■■□□□ 1.08
CASC4-204ENST00000557945 hCG_1818297A0A087WSY0 165 aa21.77■■□□□ 1.08
CASC4-204ENST00000557945 ANTXRLA6NF34 631 aa21.77■■□□□ 1.08
CASC4-204ENST00000557945 CBX4O00257 560 aa21.77■■□□□ 1.08
CASC4-204ENST00000557945 KCNK3O14649 394 aa21.77■■□□□ 1.08
CASC4-204ENST00000557945 ZFXP17010 805 aaPredicted RBP21.77■■□□□ 1.08
CASC4-204ENST00000557945 TIE1P35590 1138 aa21.77■■□□□ 1.08
CASC4-204ENST00000557945 EGFLAMQ63HQ2 1017 aa21.77■■□□□ 1.08
CASC4-204ENST00000557945 CWF19L1Q69YN2 538 aaKnown RBP21.77■■□□□ 1.08
CASC4-204ENST00000557945 AADACL2Q6P093 401 aa21.77■■□□□ 1.08
CASC4-204ENST00000557945 CCDC105Q8IYK2 499 aa21.77■■□□□ 1.08
CASC4-204ENST00000557945 DCAF4L2Q8NA75 395 aa21.77■■□□□ 1.08
CASC4-204ENST00000557945 CCDC26Q8TAB7 109 aa21.77■■□□□ 1.08
CASC4-204ENST00000557945 OSBPL8Q9BZF1 889 aa21.77■■□□□ 1.08
CASC4-204ENST00000557945 LRRC19Q9H756 370 aa21.77■■□□□ 1.08
CASC4-204ENST00000557945 ZDHHC4Q9NPG8 344 aa21.77■■□□□ 1.08
CASC4-204ENST00000557945 HPCAL4Q9UM19 191 aa21.77■■□□□ 1.08
CASC4-204ENST00000557945 ARHGAP42A6NI28 874 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 SNAP91O60641 907 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 CST8O60676 142 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 ASLP04424 464 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 DCNP07585 359 aaKnown RBP21.76■■□□□ 1.07
CASC4-204ENST00000557945 GLDCP23378 1020 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 CTSOP43234 321 aaPredicted RBP21.76■■□□□ 1.07
CASC4-204ENST00000557945 ECT2LQ008S8 904 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 SULT2A1Q06520 285 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 PAFAH1B3Q15102 231 aaKnown RBP21.76■■□□□ 1.07
CASC4-204ENST00000557945 PPP2R5EQ16537 467 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 DCAF12L1Q5VU92 463 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 AFMIDQ63HM1 303 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 Q6ZS52 159 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 ARHGAP12Q8IWW6 846 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 CCDC33Q8N5R6 958 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 ZNF513Q8N8E2 541 aaPredicted RBP21.76■■□□□ 1.07
CASC4-204ENST00000557945 PRDM16Q9HAZ2 1276 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.76■■□□□ 1.07
CASC4-204ENST00000557945 VPS51Q9UID3 782 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 PLA2G4CQ9UP65 541 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 STARD13Q9Y3M8 1113 aa21.76■■□□□ 1.07
CASC4-204ENST00000557945 MFSD11O43934 449 aa21.75■■□□□ 1.07
CASC4-204ENST00000557945 DLDP09622 509 aaKnown RBP21.75■■□□□ 1.07
CASC4-204ENST00000557945 KIR2DL1P43626 348 aaPredicted RBP21.75■■□□□ 1.07
CASC4-204ENST00000557945 PAPOLAP51003 745 aaKnown RBP21.75■■□□□ 1.07
CASC4-204ENST00000557945 MRPS21P82921 87 aaKnown RBP21.75■■□□□ 1.07
CASC4-204ENST00000557945 GBE1Q04446 702 aa21.75■■□□□ 1.07
CASC4-204ENST00000557945 FZD5Q13467 585 aa21.75■■□□□ 1.07
CASC4-204ENST00000557945 FNDC3BQ53EP0 1204 aaKnown RBP21.75■■□□□ 1.07
CASC4-204ENST00000557945 CCDC181Q5TID7 509 aa21.75■■□□□ 1.07
CASC4-204ENST00000557945 SLC9A4Q6AI14 798 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms