RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 GJB7Q6PEY0 223 aa16.43■□□□□ 0.22
SCFD1-224ENST00000557713 DEFB106AQ8N104 65 aa16.43■□□□□ 0.22
SCFD1-224ENST00000557713 EID2Q8N6I1 236 aa16.43■□□□□ 0.22
SCFD1-224ENST00000557713 MFSD2AQ8NA29 543 aa16.43■□□□□ 0.22
SCFD1-224ENST00000557713 TSC1Q92574 1164 aa16.43■□□□□ 0.22
SCFD1-224ENST00000557713 KDM4CQ9H3R0 1056 aa16.43■□□□□ 0.22
SCFD1-224ENST00000557713 ERVMER34-1Q9H9K5 563 aa16.43■□□□□ 0.22
SCFD1-224ENST00000557713 ASNSD1Q9NWL6 643 aa16.43■□□□□ 0.22
SCFD1-224ENST00000557713 SARDHQ9UL12 918 aa16.43■□□□□ 0.22
SCFD1-224ENST00000557713 TP53BP1Q12888 1972 aaPredicted RBP16.42■□□□□ 0.22
SCFD1-224ENST00000557713 NYNRINQ9P2P1 1898 aaKnown RBP16.42■□□□□ 0.22
SCFD1-224ENST00000557713 PLK4O00444 970 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 SLC7A4O43246 635 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 ATP9BO43861 1147 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 RTN2O75298 545 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 CDK4P11802 303 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 SLC9A1P19634 815 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 CCR1P32246 355 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 ARRB1P49407 418 aaPredicted RBP16.42■□□□□ 0.22
SCFD1-224ENST00000557713 OXCT1P55809 520 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 CDK17Q00537 523 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 PAK1Q13153 545 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 SLC45A4Q5BKX6 768 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 EFHC1Q5JVL4 640 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 RABGAP1LQ5R372 815 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 NAPEPLDQ6IQ20 393 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 KANSL1Q7Z3B3 1105 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 SPATS2Q86XZ4 545 aaKnown RBP16.42■□□□□ 0.22
SCFD1-224ENST00000557713 OR52K2Q8NGK3 314 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 LRIG1Q96JA1 1093 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 CPXM1Q96SM3 734 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 FEM1AQ9BSK4 669 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 FAM204AQ9H8W3 233 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 DDIT4Q9NX09 232 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 PPM1HQ9ULR3 514 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 OR51B4Q9Y5P0 310 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 IGSF10Q6WRI0 2623 aa16.42■□□□□ 0.22
SCFD1-224ENST00000557713 PLRG1O43660 514 aaKnown RBP16.41■□□□□ 0.22
SCFD1-224ENST00000557713 RFPL3O75679 317 aa16.41■□□□□ 0.22
SCFD1-224ENST00000557713 ACADVLP49748 655 aa16.41■□□□□ 0.22
SCFD1-224ENST00000557713 CLDN6P56747 220 aa16.41■□□□□ 0.22
SCFD1-224ENST00000557713 AUHQ13825 339 aaKnown RBP16.41■□□□□ 0.22
SCFD1-224ENST00000557713 SFMBT2Q5VUG0 894 aa16.41■□□□□ 0.22
SCFD1-224ENST00000557713 FAM46CQ5VWP2 391 aa16.41■□□□□ 0.22
SCFD1-224ENST00000557713 TRIM65Q6PJ69 517 aa16.41■□□□□ 0.22
SCFD1-224ENST00000557713 PRPF39Q86UA1 669 aaKnown RBP16.41■□□□□ 0.22
SCFD1-224ENST00000557713 IQCHQ86VS3 1027 aa16.41■□□□□ 0.22
SCFD1-224ENST00000557713 OR8D1Q8WZ84 308 aa16.41■□□□□ 0.22
SCFD1-224ENST00000557713 RNF34Q969K3 372 aa16.41■□□□□ 0.22
SCFD1-224ENST00000557713 PPP1R13BQ96KQ4 1090 aa16.41■□□□□ 0.22
SCFD1-224ENST00000557713 FAM81BQ96LP2 452 aa16.41■□□□□ 0.22
SCFD1-224ENST00000557713 PPP1R9BQ96SB3 815 aa16.41■□□□□ 0.22
SCFD1-224ENST00000557713 CRACR2AQ9BSW2 395 aa16.41■□□□□ 0.22
SCFD1-224ENST00000557713 PCDHGC3Q9UN70 934 aa16.41■□□□□ 0.22
SCFD1-224ENST00000557713 APC2O95996 2303 aa16.41■□□□□ 0.22
SCFD1-224ENST00000557713 SYNJ2BP-COX16A0A087WUM0 186 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 MCF2LO15068 1137 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 HSF2BPO75031 334 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 JUPP14923 745 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 NUDT1P36639 197 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 IRAK1P51617 712 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 APBA1Q02410 837 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 CENPCQ03188 943 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 CNTN1Q12860 1018 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 DLG2Q15700 870 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 ARHGAP44Q17R89 818 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 C5orf22Q49AR2 442 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 ACCSLQ4AC99 568 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 AGBL4Q5VU57 503 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 DSG4Q86SJ6 1040 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 TRIM69Q86WT6 500 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 OXR1Q8N573 874 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 SHC3Q92529 594 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 RPRD1AQ96P16 312 aaPredicted RBP16.4■□□□□ 0.22
SCFD1-224ENST00000557713 BBC3Q96PG8 261 aaPredicted RBP16.4■□□□□ 0.22
SCFD1-224ENST00000557713 COX16Q9P0S2 106 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 SLC25A13Q9UJS0 675 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 VANGL2Q9ULK5 521 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 DMTF1Q9Y222 760 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 TBC1D30Q9Y2I9 924 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 HS3ST4Q9Y661 456 aa16.4■□□□□ 0.22
SCFD1-224ENST00000557713 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.39■□□□□ 0.21
SCFD1-224ENST00000557713 ALOX15BO15296 676 aa16.39■□□□□ 0.21
SCFD1-224ENST00000557713 GADD45BO75293 160 aaPredicted RBP16.39■□□□□ 0.21
SCFD1-224ENST00000557713 GRAP2O75791 330 aa16.39■□□□□ 0.21
SCFD1-224ENST00000557713 FGFR1OPO95684 399 aaKnown RBP16.39■□□□□ 0.21
SCFD1-224ENST00000557713 MAT2AP31153 395 aaKnown RBP16.39■□□□□ 0.21
SCFD1-224ENST00000557713 HNF1BP35680 557 aa16.39■□□□□ 0.21
SCFD1-224ENST00000557713 USP8P40818 1118 aa16.39■□□□□ 0.21
SCFD1-224ENST00000557713 OVGP1Q12889 678 aa16.39■□□□□ 0.21
SCFD1-224ENST00000557713 MTA1Q13330 715 aa16.39■□□□□ 0.21
SCFD1-224ENST00000557713 ZNF177Q13360 481 aaPredicted RBP16.39■□□□□ 0.21
SCFD1-224ENST00000557713 SMYD5Q6GMV2 418 aa16.39■□□□□ 0.21
SCFD1-224ENST00000557713 FBXL19Q6PCT2 694 aa16.39■□□□□ 0.21
SCFD1-224ENST00000557713 C11orf57Q6ZUT1 292 aaPredicted RBP16.39■□□□□ 0.21
SCFD1-224ENST00000557713 FAM183BPQ6ZVS7 135 aa16.39■□□□□ 0.21
SCFD1-224ENST00000557713 C14orf80Q86SX3 495 aa16.39■□□□□ 0.21
SCFD1-224ENST00000557713 SH2D3CQ8N5H7 860 aa16.39■□□□□ 0.21
SCFD1-224ENST00000557713 PIP4K2CQ8TBX8 421 aa16.39■□□□□ 0.21
SCFD1-224ENST00000557713 APEX2Q9UBZ4 518 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms