RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-211	ENST00000557623	APCDD1	Q8J025	514 aa		12.84	□□□□□ -0.35
SLIRP-211	ENST00000557623	FAM160A2	Q8N612	972 aa	Predicted RBP	12.84	□□□□□ -0.35
SLIRP-211	ENST00000557623	CCDC185	Q8N715	623 aa		12.84	□□□□□ -0.35
SLIRP-211	ENST00000557623	OR2T3	Q8NH03	318 aa		12.84	□□□□□ -0.35
SLIRP-211	ENST00000557623	PRCC	Q92733	491 aa	Predicted RBP	12.84	□□□□□ -0.35
SLIRP-211	ENST00000557623	MRGPRX1	Q96LB2	322 aa		12.84	□□□□□ -0.35
SLIRP-211	ENST00000557623	FEM1A	Q9BSK4	669 aa		12.84	□□□□□ -0.35
SLIRP-211	ENST00000557623	RAB6C	Q9H0N0	254 aa		12.84	□□□□□ -0.35
SLIRP-211	ENST00000557623	MUC3B	Q9H195	1237 aa		12.84	□□□□□ -0.35
SLIRP-211	ENST00000557623	PRDM16	Q9HAZ2	1276 aa		12.84	□□□□□ -0.35
SLIRP-211	ENST00000557623	MPP6	Q9NZW5	540 aa		12.84	□□□□□ -0.35
SLIRP-211	ENST00000557623	SLC25A13	Q9UJS0	675 aa		12.84	□□□□□ -0.35
SLIRP-211	ENST00000557623	TNRC6B	Q9UPQ9	1833 aa	Known RBP	12.83	□□□□□ -0.35
SLIRP-211	ENST00000557623	EIF3CL	B5ME19	914 aa	Known RBP	12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	AKR1B15	C9JRZ8	316 aa	Predicted RBP	12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	C3orf80	F5H4A9	247 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	RET	P07949	1114 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	HLA-E	P13747	358 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	L1CAM	P32004	1257 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	ADK	P55263	362 aa	Known RBP	12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	OGDH	Q02218	1023 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	SLC18A3	Q16572	532 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	LPAL2	Q16609	132 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	PLK5	Q496M5	336 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	MANEAL	Q5VSG8	457 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	KIAA1324	Q6UXG2	1013 aa	Known RBP	12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	SLC36A4	Q6YBV0	504 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	TFAP2D	Q7Z6R9	452 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	METTL3	Q86U44	580 aa	Known RBP	12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	KBTBD6	Q86V97	674 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	TMPRSS6	Q8IU80	811 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	GPR161	Q8N6U8	529 aa	Known RBP	12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	TBC1D31	Q96DN5	1066 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	ALG14	Q96F25	216 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	SIPA1	Q96FS4	1042 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	MYO19	Q96H55	970 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	MRGPRX3	Q96LB0	322 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	EIF3C	Q99613	913 aa	Known RBP	12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	THAP2	Q9H0W7	228 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	VPS28	Q9UK41	221 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	FZD10	Q9ULW2	581 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	ADGRG1	Q9Y653	693 aa		12.83	□□□□□ -0.36
SLIRP-211	ENST00000557623	ABCA7	Q8IZY2	2146 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	ILVBL	A1L0T0	632 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	TARSL2	A2RTX5	802 aa	Known RBP	12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	DCLK1	O15075	740 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	AP5Z1	O43299	807 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	AKR1B10	O60218	316 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	LRP3	O75074	770 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	LRIG2	O94898	1065 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	CYP1A2	P05177	515 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	ACADM	P11310	421 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	RHOQ	P17081	205 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	HTR7	P34969	479 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	ETFB	P38117	255 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	MAPKAPK2	P49137	400 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	COPA	P53621	1224 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	GFPT1	Q06210	699 aa	Predicted RBP	12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	TBX2	Q13207	712 aa	Predicted RBP	12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	PIGH	Q14442	188 aa	Predicted RBP	12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	HNRNPA1L2	Q32P51	320 aa	Known RBP	12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	MAP7D1	Q3KQU3	841 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	SPDYC	Q5MJ68	293 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	RWDD4	Q6NW29	188 aa	Known RBP	12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	RLN3	Q8WXF3	142 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	ERLEC1	Q96DZ1	483 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	MRFAP1L1	Q96HT8	127 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	C2orf49	Q9BVC5	232 aa	Predicted RBP	12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	DUSP15	Q9H1R2	295 aa	Predicted RBP	12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	PRSS16	Q9NQE7	514 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	DONSON	Q9NYP3	566 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	IP6K2	Q9UHH9	426 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	NENF	Q9UMX5	172 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	INVS	Q9Y283	1065 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	OR51B4	Q9Y5P0	310 aa		12.82	□□□□□ -0.36
SLIRP-211	ENST00000557623	EDDM13	A0A1B0GTR0	161 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	PRPSAP2	O60256	369 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	RNASEH1	O60930	286 aa	Known RBP	12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	EPN2	O95208	641 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	H2AFZ	P0C0S5	128 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	OXTR	P30559	389 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	CTSO	P43234	321 aa	Predicted RBP	12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	ZNF75D	P51815	510 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	GALC	P54803	685 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	ZBTB16	Q05516	673 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	ZNF252P-AS1	Q0IIN9	211 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	SFSWAP	Q12872	951 aa	Known RBP	12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	ASTE1	Q2TB18	679 aa	Predicted RBP	12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	ARTN	Q5T4W7	220 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	ERMARD	Q5T6L9	678 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	PMS2CL	Q68D20	193 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	H2AFV	Q71UI9	128 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	LPCAT2	Q7L5N7	544 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	GAS2L3	Q86XJ1	694 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	PSTK	Q8IV42	348 aa	Known RBP	12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	ZNF366	Q8N895	744 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	DCAF4L2	Q8NA75	395 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	OR52K2	Q8NGK3	314 aa		12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	12.81	□□□□□ -0.36
SLIRP-211	ENST00000557623	RPL10L	Q96L21	214 aa	Known RBP	12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms