RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 MAN2B1O00754 1011 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 SCAMP3O14828 347 aaKnown RBP11.54□□□□□ -0.56
FOXN3-212ENST00000556541 PPP1R12AO14974 1030 aaPredicted RBP11.54□□□□□ -0.56
FOXN3-212ENST00000556541 MTSS1O43312 755 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 MFSD11O43934 449 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 TULP3O75386 442 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 FGGP02679 453 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 ASLP04424 464 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 ASGR2P07307 311 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 PABPC1P11940 636 aaKnown RBP11.54□□□□□ -0.56
FOXN3-212ENST00000556541 KRT10P13645 584 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 SP100P23497 879 aaPredicted RBP11.54□□□□□ -0.56
FOXN3-212ENST00000556541 HLA-FP30511 346 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 CTHP32929 405 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 GARSP41250 739 aaKnown RBP11.54□□□□□ -0.56
FOXN3-212ENST00000556541 DGKGP49619 791 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 PPIDQ08752 370 aaKnown RBP11.54□□□□□ -0.56
FOXN3-212ENST00000556541 SERINC3Q13530 473 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 POLD3Q15054 466 aaPredicted RBP11.54□□□□□ -0.56
FOXN3-212ENST00000556541 CCNG2Q16589 344 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 PLEKHG6Q3KR16 790 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 GRAMD4Q6IC98 578 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 TIGD7Q6NT04 549 aaPredicted RBP11.54□□□□□ -0.56
FOXN3-212ENST00000556541 TERB1Q8NA31 727 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 SLC35B2Q8TB61 432 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 P3H4Q92791 437 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 NKD2Q969F2 451 aaPredicted RBP11.54□□□□□ -0.56
FOXN3-212ENST00000556541 CHFRQ96EP1 664 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 PNKPQ96T60 521 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 HERPUD2Q9BSE4 406 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 C2orf49Q9BVC5 232 aaPredicted RBP11.54□□□□□ -0.56
FOXN3-212ENST00000556541 GTSE1Q9NYZ3 720 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 AMACRQ9UHK6 382 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 STARD13Q9Y3M8 1113 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 SHROOM3Q8TF72 1996 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 F5P12259 2224 aa11.54□□□□□ -0.56
FOXN3-212ENST00000556541 BCLAF3A2AJT9 711 aaKnown RBP11.53□□□□□ -0.56
FOXN3-212ENST00000556541 CFAP69A5D8W1 941 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 RASA4BC9J798 803 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 SPECC1L-ADORA2AF8WAN1 911 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 RASA4O43374 803 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 KDELR3O43731 214 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 ZMPSTE24O75844 475 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 CCNCP24863 283 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 CXCR5P32302 372 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 GRIA2P42262 883 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 PAFAH1B1P43034 410 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 TNFRSF4P43489 277 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 CLCN6P51797 869 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 GBE1Q04446 702 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 CKAP4Q07065 602 aaKnown RBP11.53□□□□□ -0.56
FOXN3-212ENST00000556541 IL10RBQ08334 325 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 ADCY2Q08462 1091 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 LMAN2Q12907 356 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 SLC10A2Q12908 348 aaPredicted RBP11.53□□□□□ -0.56
FOXN3-212ENST00000556541 RFTN1Q14699 578 aaPredicted RBP11.53□□□□□ -0.56
FOXN3-212ENST00000556541 PRKD1Q15139 912 aaPredicted RBP11.53□□□□□ -0.56
FOXN3-212ENST00000556541 INO80DQ53TQ3 878 aaPredicted RBP11.53□□□□□ -0.56
FOXN3-212ENST00000556541 FSCBQ5H9T9 825 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 TMEM196Q5HYL7 178 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 AADACL2Q6P093 401 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 TFAP2DQ7Z6R9 452 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 CIR1Q86X95 450 aaPredicted RBP11.53□□□□□ -0.56
FOXN3-212ENST00000556541 RNF135Q8IUD6 432 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 GJD3Q8N144 294 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 CARNMT1Q8N4J0 409 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 ACTL9Q8TC94 416 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 WFDC5Q8TCV5 224 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 MAML1Q92585 1016 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 HAUS1Q96CS2 278 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 RUNDC3BQ96NL0 473 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 SLC39A8Q9C0K1 460 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 L2HGDHQ9H9P8 463 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 PDFQ9HBH1 243 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 NDFIP2Q9NV92 336 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 DNAJC17Q9NVM6 304 aaKnown RBP11.53□□□□□ -0.56
FOXN3-212ENST00000556541 GGA2Q9UJY4 613 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 DRG1Q9Y295 367 aaKnown RBP11.53□□□□□ -0.56
FOXN3-212ENST00000556541 MRFAP1Q9Y605 127 aa11.53□□□□□ -0.56
FOXN3-212ENST00000556541 GOLGA6L10A0A0M3HER8 536 aa11.52□□□□□ -0.57
FOXN3-212ENST00000556541 MCF2LO15068 1137 aa11.52□□□□□ -0.57
FOXN3-212ENST00000556541 PRAMEF11O60813 436 aa11.52□□□□□ -0.57
FOXN3-212ENST00000556541 APODP05090 189 aa11.52□□□□□ -0.57
FOXN3-212ENST00000556541 SRPRAP08240 638 aaKnown RBP11.52□□□□□ -0.57
FOXN3-212ENST00000556541 PECAM1P16284 738 aaPredicted RBP11.52□□□□□ -0.57
FOXN3-212ENST00000556541 DRD1P21728 446 aa11.52□□□□□ -0.57
FOXN3-212ENST00000556541 CSKP41240 450 aa11.52□□□□□ -0.57
FOXN3-212ENST00000556541 FNTAP49354 379 aa11.52□□□□□ -0.57
FOXN3-212ENST00000556541 DNA2P51530 1060 aa11.52□□□□□ -0.57
FOXN3-212ENST00000556541 STARD6P59095 220 aa11.52□□□□□ -0.57
FOXN3-212ENST00000556541 OTUD4Q01804 1114 aaKnown RBP11.52□□□□□ -0.57
FOXN3-212ENST00000556541 OASLQ15646 514 aaKnown RBP11.52□□□□□ -0.57
FOXN3-212ENST00000556541 MLF2Q15773 248 aaPredicted RBP11.52□□□□□ -0.57
FOXN3-212ENST00000556541 LONRF2Q1L5Z9 754 aa11.52□□□□□ -0.57
FOXN3-212ENST00000556541 HSF5Q4G112 596 aaPredicted RBP11.52□□□□□ -0.57
FOXN3-212ENST00000556541 FBXO43Q4G163 708 aa11.52□□□□□ -0.57
FOXN3-212ENST00000556541 SLC44A4Q53GD3 710 aa11.52□□□□□ -0.57
FOXN3-212ENST00000556541 SLC45A4Q5BKX6 768 aa11.52□□□□□ -0.57
FOXN3-212ENST00000556541 PITRM1Q5JRX3 1037 aa11.52□□□□□ -0.57
FOXN3-212ENST00000556541 CCDC181Q5TID7 509 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms