RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 WNT6Q9Y6F9 365 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 CXorf51AA0A1B0GTR3 108 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 GOLGA6CA6NDK9 693 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 GOLGA6BA6NDN3 693 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 GRXCR2A6NFK2 248 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-218ENST00000556343 NEDD8-MDP1E9PL57 170 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 GFRA2O00451 464 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 SCAMP3O14828 347 aaKnown RBP9.43□□□□□ -0.9
ACTN1-218ENST00000556343 MATN3O15232 486 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 HOXC11O43248 304 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-218ENST00000556343 RAD51CO43502 376 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 TIMM44O43615 452 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 KDELR3O43731 214 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 PENKP01210 267 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-218ENST00000556343 GOLGA6DP0CG33 693 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 ADH5P11766 374 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 TYRP14679 529 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 RBL1P28749 1068 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 GDI1P31150 447 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 ADCY8P40145 1251 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 KCNJ1P48048 391 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 IL10RBQ08334 325 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 SLC20A2Q08357 652 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 SLC10A2Q12908 348 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-218ENST00000556343 SERINC3Q13530 473 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 RUNX3Q13761 415 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 PRPSAP1Q14558 356 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 RFTN1Q14699 578 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-218ENST00000556343 SMAD2Q15796 467 aaKnown RBP9.43□□□□□ -0.9
ACTN1-218ENST00000556343 P3H1Q32P28 736 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 EML3Q32P44 896 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 ITPRIPL1Q6GPH6 555 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 RHBDF2Q6PJF5 856 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 VITQ6UXI7 678 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 ARHGEF18Q6ZSZ5 1173 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 CIR1Q86X95 450 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-218ENST00000556343 TMEM25Q86YD3 366 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 JAMLQ86YT9 394 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 ZDHHC14Q8IZN3 488 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 GPR161Q8N6U8 529 aaKnown RBP9.43□□□□□ -0.9
ACTN1-218ENST00000556343 FAM71DQ8N9W8 422 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 MYRIPQ8NFW9 859 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 WFIKKN2Q8TEU8 576 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 CASKIN2Q8WXE0 1202 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 ARHGEF2Q92974 986 aaKnown RBP9.43□□□□□ -0.9
ACTN1-218ENST00000556343 ACDQ96AP0 544 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 PRICKLE1Q96MT3 831 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-218ENST00000556343 FAM83CQ9BQN1 747 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 ERP44Q9BS26 406 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 TMEM121Q9BTD3 319 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 LRRC1Q9BTT6 524 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 BRD9Q9H8M2 597 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 ECT2Q9H8V3 914 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 PCDH9Q9HC56 1237 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 FAM114A2Q9NRY5 505 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 GOLGA6AQ9NYA3 693 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 SEPT10Q9P0V9 454 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 ASIC3Q9UHC3 531 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 CDH22Q9UJ99 828 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 VPS28Q9UK41 221 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 NEU3Q9UQ49 428 aa9.43□□□□□ -0.9
ACTN1-218ENST00000556343 C5orf60A6NFR6 353 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 ANHXE9PGG2 379 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 SMAPO00193 183 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 TTI1O43156 1089 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 PSMD3O43242 534 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 OPHN1O60890 802 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 GCATO75600 419 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 MAP3K6O95382 1288 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 ATP5BP06576 529 aaKnown RBP9.42□□□□□ -0.9
ACTN1-218ENST00000556343 RHOXF2BP0C7M4 288 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 CCNB1P14635 433 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 ITIH2P19823 946 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 CES1P23141 567 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 FCARP24071 287 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 HOXD9P28356 352 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-218ENST00000556343 FDFT1P37268 417 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 NNMTP40261 264 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 LMAN1P49257 510 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 PLK1P53350 603 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 TERF1P54274 439 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 DRG2P55039 364 aaKnown RBP9.42□□□□□ -0.9
ACTN1-218ENST00000556343 SARNPP82979 210 aaKnown RBP9.42□□□□□ -0.9
ACTN1-218ENST00000556343 PFKPQ01813 784 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 CAV1Q03135 178 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 CALCOCO2Q13137 446 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 PTK6Q13882 451 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 HNRNPDQ14103 355 aaKnown RBP9.42□□□□□ -0.9
ACTN1-218ENST00000556343 PRKD1Q15139 912 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-218ENST00000556343 ITPRIPL2Q3MIP1 535 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 MARC1Q5VT66 337 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 FYB2Q5VWT5 728 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 PTCRAQ6ISU1 281 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-218ENST00000556343 TTC27Q6P3X3 843 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 PARM1Q6UWI2 310 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 CEP128Q6ZU80 1094 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 PID1Q7Z2X4 250 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 ARHGAP12Q8IWW6 846 aa9.42□□□□□ -0.9
ACTN1-218ENST00000556343 SUGP1Q8IWZ8 645 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms