RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 MUC3BQ9H195 1237 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 MAGEH1Q9H213 219 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 NDFIP2Q9NV92 336 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 MARK1Q9P0L2 795 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 ZNF212Q9UDV6 495 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 PCYOX1Q9UHG3 505 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 TBC1D30Q9Y2I9 924 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 BCLAF3A2AJT9 711 aaKnown RBP11.3□□□□□ -0.6
TMEM260-208ENST00000555905 CFAP69A5D8W1 941 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 EFCAB8A8MWE9 144 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 C2CD4DB7Z1M9 353 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 RASA4BC9J798 803 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 ANHXE9PGG2 379 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 SGK1O00141 431 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 CHADO15335 359 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 RASA4O43374 803 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 STK10O94804 968 aaKnown RBP11.3□□□□□ -0.6
TMEM260-208ENST00000555905 ECEL1O95672 775 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 GAS8O95995 478 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 PENKP01210 267 aaPredicted RBP11.3□□□□□ -0.6
TMEM260-208ENST00000555905 CYP17A1P05093 508 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 ADH5P11766 374 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 TYRP14679 529 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 ARSAP15289 507 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 GARSP41250 739 aaKnown RBP11.3□□□□□ -0.6
TMEM260-208ENST00000555905 KCNJ1P48048 391 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 PAPOLAP51003 745 aaKnown RBP11.3□□□□□ -0.6
TMEM260-208ENST00000555905 DR1Q01658 176 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 GNA12Q03113 381 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 GAD2Q05329 585 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 ZNF33AQ06730 810 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 PPIDQ08752 370 aaKnown RBP11.3□□□□□ -0.6
TMEM260-208ENST00000555905 AP1B1Q10567 949 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 GRM2Q14416 872 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 OASLQ15646 514 aaKnown RBP11.3□□□□□ -0.6
TMEM260-208ENST00000555905 RNF219Q5W0B1 726 aaPredicted RBP11.3□□□□□ -0.6
TMEM260-208ENST00000555905 HEATR6Q6AI08 1181 aaKnown RBP11.3□□□□□ -0.6
TMEM260-208ENST00000555905 TRIM68Q6AZZ1 485 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 IL31Q6EBC2 164 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 C8orf74Q6P047 294 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 TTC27Q6P3X3 843 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 RHBDF2Q6PJF5 856 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 ARHGAP12Q8IWW6 846 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 NOA1Q8NC60 698 aaKnown RBP11.3□□□□□ -0.6
TMEM260-208ENST00000555905 NETO2Q8NC67 525 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 FIBINQ8TAL6 211 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 NXPE3Q969Y0 559 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 HDAC11Q96DB2 347 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 ASIC4Q96FT7 647 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 HMCESQ96FZ2 354 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 ZFYVE19Q96K21 471 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 XPO6Q96QU8 1125 aaKnown RBP11.3□□□□□ -0.6
TMEM260-208ENST00000555905 LGMNQ99538 433 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 FAM83CQ9BQN1 747 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 TMEM121Q9BTD3 319 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 SLC2A11Q9BYW1 496 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 PLA2G2FQ9BZM2 168 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 EBF3Q9H4W6 596 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 NOL6Q9H6R4 1146 aaKnown RBP11.3□□□□□ -0.6
TMEM260-208ENST00000555905 PLK2Q9NYY3 685 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 KIAA1522Q9P206 1035 aaPredicted RBP11.3□□□□□ -0.6
TMEM260-208ENST00000555905 AMACRQ9UHK6 382 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 HPCAL4Q9UM19 191 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 NUMBLQ9Y6R0 609 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 SHROOM3Q8TF72 1996 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 C5orf42Q9H799 3197 aa11.3□□□□□ -0.6
TMEM260-208ENST00000555905 MYOFQ9NZM1 2061 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 SNPHO15079 494 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 KCNN4O15554 427 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 HOXC11O43248 304 aaPredicted RBP11.29□□□□□ -0.6
TMEM260-208ENST00000555905 MTSS1O43312 755 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 CCNCP24863 283 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 GDI1P31150 447 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 STIP1P31948 543 aaKnown RBP11.29□□□□□ -0.6
TMEM260-208ENST00000555905 SERINC3Q13530 473 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 PRKD1Q15139 912 aaPredicted RBP11.29□□□□□ -0.6
TMEM260-208ENST00000555905 PPP1R7Q15435 360 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 GLE1Q53GS7 698 aaKnown RBP11.29□□□□□ -0.6
TMEM260-208ENST00000555905 TEX35Q5T0J7 233 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 RNF43Q68DV7 783 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 CXorf57Q6NSI4 855 aaKnown RBP11.29□□□□□ -0.6
TMEM260-208ENST00000555905 TIGD7Q6NT04 549 aaPredicted RBP11.29□□□□□ -0.6
TMEM260-208ENST00000555905 SYDE1Q6ZW31 735 aaPredicted RBP11.29□□□□□ -0.6
TMEM260-208ENST00000555905 TP53INP2Q8IXH6 220 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 CCDC13Q8IYE1 715 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 ALLCQ8N6M5 410 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 CCDC89Q8N998 374 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 LRRN4CLQ8ND94 238 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 NSMCE1Q8WV22 266 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 SLCO2A1Q92959 643 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 ARHGEF2Q92974 986 aaKnown RBP11.29□□□□□ -0.6
TMEM260-208ENST00000555905 TSGA13Q96PP4 275 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 SPON2Q9BUD6 331 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 BRD9Q9H8M2 597 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 ECT2Q9H8V3 914 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 SP110Q9HB58 689 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 LIMD1Q9UGP4 676 aa11.29□□□□□ -0.6
TMEM260-208ENST00000555905 IPO11Q9UI26 975 aaKnown RBP11.29□□□□□ -0.6
TMEM260-208ENST00000555905 NYNRINQ9P2P1 1898 aaKnown RBP11.29□□□□□ -0.6
TMEM260-208ENST00000555905 CHD5Q8TDI0 1954 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms