RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 DRAP1Q14919 205 aaPredicted RBP8.64□□□□□ -1.03
NEK9-206ENST00000555537 TGIF1Q15583 401 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 SETMARQ53H47 684 aaPredicted RBP8.64□□□□□ -1.03
NEK9-206ENST00000555537 AGBL4Q5VU57 503 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 FOXD4L5Q5VV16 416 aaPredicted RBP8.64□□□□□ -1.03
NEK9-206ENST00000555537 RAP1GAP2Q684P5 730 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 NUGGCQ68CJ6 796 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 MSANTD2Q6P1R3 559 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 GUSBP11Q6P575 273 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 TRIM69Q86WT6 500 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 CIR1Q86X95 450 aaPredicted RBP8.64□□□□□ -1.03
NEK9-206ENST00000555537 CCDC117Q8IWD4 279 aaPredicted RBP8.64□□□□□ -1.03
NEK9-206ENST00000555537 LGI2Q8N0V4 545 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 SLC22A18ASQ8N1D0 253 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 TMEM145Q8NBT3 493 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 FRS2Q8WU20 508 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 TMEM174Q8WUU8 243 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 FOXD4L4Q8WXT5 416 aaPredicted RBP8.64□□□□□ -1.03
NEK9-206ENST00000555537 EXTL1Q92935 676 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 AZIN2Q96A70 460 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 EEF2KMTQ96G04 330 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 FCRL2Q96LA5 508 aaPredicted RBP8.64□□□□□ -1.03
NEK9-206ENST00000555537 KDM4CQ9H3R0 1056 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 TMEM8AQ9HCN3 771 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 DNAJC28Q9NX36 388 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 NLGN3Q9NZ94 848 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 HESX1Q9UBX0 185 aa8.64□□□□□ -1.03
NEK9-206ENST00000555537 A0A1W2PQU0 124 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 TYW5A2RUC4 315 aaKnown RBP8.63□□□□□ -1.03
NEK9-206ENST00000555537 CDRT15L2A8MXV6 281 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 RNF103O00237 685 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 SCAMP1O15126 338 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 SUV39H1O43463 412 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 CALUO43852 315 aaPredicted RBP8.63□□□□□ -1.03
NEK9-206ENST00000555537 FYNP06241 537 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 GP1BAP07359 652 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 ALPPL2P10696 532 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 KRT13P13646 458 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 PDGFRAP16234 1089 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 ZNF18P17022 549 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 ITGB6P18564 788 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 NR2F2P24468 414 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 NNMTP40261 264 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 DUSP3P51452 185 aaPredicted RBP8.63□□□□□ -1.03
NEK9-206ENST00000555537 BST2Q10589 180 aaKnown RBP8.63□□□□□ -1.03
NEK9-206ENST00000555537 SGO2Q562F6 1265 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 PERM1Q5SV97 790 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 KRT39Q6A163 491 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 OR6B2Q6IFH4 312 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 PMF1Q6P1K2 205 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 ATG14Q6ZNE5 492 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 Q6ZSR6 202 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 EFL1Q7Z2Z2 1120 aaKnown RBP8.63□□□□□ -1.03
NEK9-206ENST00000555537 FAM186BQ8IYM0 893 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 ZNF557Q8N988 423 aaPredicted RBP8.63□□□□□ -1.03
NEK9-206ENST00000555537 KCTD13Q8WZ19 329 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 TFAP2BQ92481 460 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 FAM131CQ96AQ9 280 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 CCDC97Q96F63 343 aaPredicted RBP8.63□□□□□ -1.03
NEK9-206ENST00000555537 PAGE5Q96GU1 130 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 SPAG5Q96R06 1193 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 CCNL2Q96S94 520 aaPredicted RBP8.63□□□□□ -1.03
NEK9-206ENST00000555537 MIS12Q9H081 205 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 CNGB3Q9NQW8 809 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 EXOC1Q9NV70 894 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 RAB20Q9NX57 234 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.63□□□□□ -1.03
NEK9-206ENST00000555537 KLF15Q9UIH9 416 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 PPM1HQ9ULR3 514 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 TPX2Q9ULW0 747 aaKnown RBP8.63□□□□□ -1.03
NEK9-206ENST00000555537 NAALADL1Q9UQQ1 740 aa8.63□□□□□ -1.03
NEK9-206ENST00000555537 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.62□□□□□ -1.03
NEK9-206ENST00000555537 NEMP2A6NFY4 417 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 AGRPO00253 132 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 SLC7A4O43246 635 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 LTFP02788 710 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 FAM87AP0C7U9 286 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 TACR2P21452 398 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 NUDT1P36639 197 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 NUCB2P80303 420 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 ZNF177Q13360 481 aaPredicted RBP8.62□□□□□ -1.03
NEK9-206ENST00000555537 ADAM9Q13443 819 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 DLG2Q15700 870 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 ZNF284Q2VY69 593 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 DEFB133Q30KQ1 61 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 ZC3H12AQ5D1E8 599 aaKnown RBP8.62□□□□□ -1.03
NEK9-206ENST00000555537 PIP5KL1Q5T9C9 394 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 FAM46CQ5VWP2 391 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 SYPL2Q5VXT5 272 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 SEL1L3Q68CR1 1132 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 IGF2-ASQ6U949 168 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 GCNT7Q6ZNI0 430 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 Q6ZVU0 165 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 USP53Q70EK8 1073 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 INTS8Q75QN2 995 aaKnown RBP8.62□□□□□ -1.03
NEK9-206ENST00000555537 FBXL13Q8NEE6 735 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 OR52K2Q8NGK3 314 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 DQX1Q8TE96 717 aaKnown RBP8.62□□□□□ -1.03
NEK9-206ENST00000555537 SLC35F5Q8WV83 523 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 OR8D1Q8WZ84 308 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms