RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 RHPN2P1A8MT19 583 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 NPC1O15118 1278 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 NDST3O95803 873 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 TSHRP16473 764 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 TGM2P21980 687 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 SHC2P98077 582 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 SLC5A9Q2M3M2 681 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 C14orf177Q52M58 125 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 USP17L6PQ6QN14 398 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 C14orf80Q86SX3 495 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 SMIM29Q86T20 159 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 ADGRF3Q8IZF5 1079 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 MYO1HQ8N1T3 1032 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 BICD2Q8TD16 824 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 GRAMD1AQ96CP6 724 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 MCRS1Q96EZ8 462 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 EIF3CQ99613 913 aaKnown RBP3.36□□□□□ -1.87
SRP54-207ENST00000555535 TRMT61BQ9BVS5 477 aaKnown RBP3.36□□□□□ -1.87
SRP54-207ENST00000555535 IL25Q9H293 177 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 SLC7A10Q9NS82 523 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 TMEM248Q9NWD8 314 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 MYO1AQ9UBC5 1043 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 PCDHB7Q9Y5E2 793 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 LMTK3Q96Q04 1460 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 GXYLT2A0PJZ3 443 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 I6L893 689 aaPredicted RBP3.35□□□□□ -1.87
SRP54-207ENST00000555535 KPNA5O15131 536 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 TAF5LO75529 589 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 NEURL1O76050 574 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 VIPP01282 170 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 CFC1BP0CG36 223 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 CFC1P0CG37 223 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 MYL4P12829 197 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 PEPDP12955 493 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 EGR1P18146 543 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 AMTP48728 403 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 POLE2P56282 527 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 ARL16Q0P5N6 197 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 PMPCAQ10713 525 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 ALG10Q5BKT4 473 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 ALG10BQ5I7T1 473 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 ENTPD8Q5MY95 495 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 ZNF771Q7L3S4 317 aaPredicted RBP3.35□□□□□ -1.87
SRP54-207ENST00000555535 TRMT1LQ7Z2T5 733 aaKnown RBP3.35□□□□□ -1.87
SRP54-207ENST00000555535 KRT27Q7Z3Y8 459 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 GLIS1Q8NBF1 620 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 LILRB1Q8NHL6 650 aaPredicted RBP3.35□□□□□ -1.87
SRP54-207ENST00000555535 SLC22A17Q8WUG5 538 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 IP6K1Q92551 441 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 TSR2Q969E8 191 aaKnown RBP3.35□□□□□ -1.87
SRP54-207ENST00000555535 TIFAQ96CG3 184 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 SCMH1Q96GD3 660 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 SNX27Q96L92 541 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 IL17FQ96PD4 163 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 PYGO2Q9BRQ0 406 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.35□□□□□ -1.87
SRP54-207ENST00000555535 MMP28Q9H239 520 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 TXNRD2Q9NNW7 524 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 KCNK9Q9NPC2 374 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 PRDM11Q9NQV5 511 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 FBXO28Q9NVF7 368 aa3.35□□□□□ -1.87
SRP54-207ENST00000555535 A0A1W2PPC4 97 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 SAC3D1A6NKF1 404 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 M0QYT0 321 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 SYT5O00445 386 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 ITGA5P08648 1049 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 SRGAP2BP0DMP2 458 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 CASP5P51878 434 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 PHEXP78562 749 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 GFOD2Q3B7J2 385 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 PLEKHO1Q53GL0 409 aaPredicted RBP3.34□□□□□ -1.87
SRP54-207ENST00000555535 EFHC1Q5JVL4 640 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 C9orf139Q6ZV77 190 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 FAM177A1Q8N128 213 aaPredicted RBP3.34□□□□□ -1.87
SRP54-207ENST00000555535 CCDC150Q8NCX0 1101 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 SRFBP1Q8NEF9 429 aaKnown RBP3.34□□□□□ -1.87
SRP54-207ENST00000555535 TTC8Q8TAM2 541 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 JDP2Q8WYK2 163 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 PAAF1Q9BRP4 392 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 SCRT2Q9NQ03 307 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 TCF19Q9Y242 345 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 MAN2B2Q9Y2E5 1009 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 NFS1Q9Y697 457 aa3.34□□□□□ -1.87
SRP54-207ENST00000555535 GOLGA6CA6NDK9 693 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 GOLGA6BA6NDN3 693 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 J3KTA2 159 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 PQBP1O60828 265 aaKnown RBP3.33□□□□□ -1.88
SRP54-207ENST00000555535 S100BP04271 92 aaPredicted RBP3.33□□□□□ -1.88
SRP54-207ENST00000555535 ALDOCP09972 364 aaKnown RBP3.33□□□□□ -1.88
SRP54-207ENST00000555535 GOLGA6DP0CG33 693 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 CHRNB2P17787 502 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 PMS2P54278 862 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 GRSF1Q12849 480 aaKnown RBP eCLIP3.33□□□□□ -1.88
SRP54-207ENST00000555535 CBFBQ13951 182 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 KRT72Q14CN4 511 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 DUSP6Q16828 381 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 BEND5Q7L4P6 421 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 ZNF367Q7RTV3 350 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 MDGA2Q7Z553 956 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 FAM185AQ8N0U4 392 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms