RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ZNF366Q8N895 744 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 SLC20A1Q8WUM9 679 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 CPA5Q8WXQ8 436 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 IGSF8Q969P0 613 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 C1orf74Q96LT6 269 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 PCMTD1Q96MG8 357 aaPredicted RBP10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 TBCBQ99426 244 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 GPR174Q9BXC1 333 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 TKTL2Q9H0I9 626 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 VANGL2Q9ULK5 521 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 TBC1D30Q9Y2I9 924 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 FLNBO75369 2602 aaKnown RBP10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 IGLV3-10A0A075B6K4 115 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 A0A1B0GTW7 788 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 SMTNL1A8MU46 457 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 MEI4A8MW99 385 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 UPK3BL1B0FP48 263 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 UPK3BL2E5RIL1 263 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 SIN3BO75182 1162 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 ENDOD1O94919 500 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 ADCY5O95622 1261 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 SYPP08247 313 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 CCDC172P0C7W6 258 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 UNGP13051 313 aaPredicted RBP10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 PDGFRAP16234 1089 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 TFE3P19532 575 aaPredicted RBP10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 CSRP1P21291 193 aaKnown RBP10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 FECHP22830 423 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 ZNF177Q13360 481 aaPredicted RBP10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 C9orf64Q5T6V5 341 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 CIR1Q86X95 450 aaPredicted RBP10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 CACUL1Q86Y37 369 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 PHF13Q86YI8 300 aaPredicted RBP10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 ZNF683Q8IZ20 524 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 RGL4Q8IZJ4 473 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 ALG14Q96F25 216 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 HAPLN3Q96S86 360 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 FEM1AQ9BSK4 669 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 ZDHHC5Q9C0B5 715 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 BTBD1Q9H0C5 482 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 PABPC3Q9H361 631 aaKnown RBP10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 SGK2Q9HBY8 427 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 OSGEPQ9NPF4 335 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 MYO6Q9UM54 1294 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 OR51B4Q9Y5P0 310 aa10.71□□□□□ -0.69
PTCD2P1-201ENST00000554393 FRYQ5TBA9 3013 aa10.71□□□□□ -0.7
PTCD2P1-201ENST00000554393 CEP295Q9C0D2 2601 aa10.71□□□□□ -0.7
PTCD2P1-201ENST00000554393 KNL1Q8NG31 2342 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 DRGXA6NNA5 263 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 BHMG1C9JSJ3 638 aaPredicted RBP10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 GOLGA8SH3BPF8 625 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 I6L893 689 aaPredicted RBP10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 KCNK5O95279 499 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 SEMA4FO95754 770 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 ADH1BP00325 375 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 ATP1A3P13637 1013 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 MZF1P28698 734 aaPredicted RBP10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 CTSOP43234 321 aaPredicted RBP10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 PTPN9P43378 593 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 NSFP46459 744 aaKnown RBP10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 ATXN3P54252 364 aaPredicted RBP10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 PTP4A2Q12974 167 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 ELAVL3Q14576 367 aaKnown RBP10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 CST6Q15828 149 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 CLEC16AQ2KHT3 1053 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 C2CD6Q53TS8 623 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 DCAF12L1Q5VU92 463 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 TRNP1Q6NT89 227 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 CAVIN1Q6NZI2 390 aaKnown RBP10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 LRRC31Q6UY01 552 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 STRADAQ7RTN6 431 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 C14orf80Q86SX3 495 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 SETD3Q86TU7 594 aaPredicted RBP10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 DHX40Q8IX18 779 aaKnown RBP10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 FRS2Q8WU20 508 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 PTPRN2Q92932 1015 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 CFAP57Q96MR6 1250 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 C11orf70Q9BRQ4 267 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 SIK2Q9H0K1 926 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 RETREG1Q9H6L5 497 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 ANLNQ9NQW6 1124 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 METTL5Q9NRN9 209 aaKnown RBP10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 DNAAF2Q9NVR5 837 aaKnown RBP10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 ADAMTS1Q9UHI8 967 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 SLCO3A1Q9UIG8 710 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 SLC25A13Q9UJS0 675 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 FZD4Q9ULV1 537 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 TPX2Q9ULW0 747 aaKnown RBP10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 NCKAP1Q9Y2A7 1128 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 PLXNA2O75051 1894 aa10.7□□□□□ -0.7
PTCD2P1-201ENST00000554393 A0A1W2PQC6 194 aa10.69□□□□□ -0.7
PTCD2P1-201ENST00000554393 C2CD4BA6NLJ0 364 aa10.69□□□□□ -0.7
PTCD2P1-201ENST00000554393 TTC34A8MYJ7 566 aa10.69□□□□□ -0.7
PTCD2P1-201ENST00000554393 ALOX15BO15296 676 aa10.69□□□□□ -0.7
PTCD2P1-201ENST00000554393 ATP9BO43861 1147 aa10.69□□□□□ -0.7
PTCD2P1-201ENST00000554393 CALB1P05937 261 aa10.69□□□□□ -0.7
PTCD2P1-201ENST00000554393 CEACAM1P13688 526 aa10.69□□□□□ -0.7
PTCD2P1-201ENST00000554393 FERP16591 822 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms